Comprehensive analysis of lncRNAs and mRNAs revealed potential participants in the process of avian reovirus infection by Shaqiu Zhang, Shaqiu Zhang, Shaqiu Zhang, Shaqiu Zhang, Jinkang Li, Mingshu Wang, Mingshu Wang, Mingshu Wang, Mingshu Wang, Renyong Jia, Renyong Jia, Renyong Jia, Renyong Jia, Shun Chen, Shun Chen, Shun Chen, Shun Chen, Mafeng Liu, Mafeng Liu, Mafeng Liu, Mafeng Liu, Dekang Zhu, Dekang Zhu, Dekang Zhu, Dekang Zhu, Xinxin Zhao, Xinxin Zhao, Xinxin Zhao, Xinxin Zhao, Ying Wu, Ying Wu, Ying Wu, Ying Wu, Qiao Yang, Qiao Yang, Qiao Yang, Qiao Yang, Juan Huang, Juan Huang, Juan Huang, Juan Huang, Xumin Ou, Xumin Ou, Xumin Ou, Xumin Ou, Di Sun, Di Sun, Di Sun, Di Sun, Bin Tian, Bin Tian, Bin Tian, Bin Tian, Yu He, Yu He, Yu He, Yu He, Zhen Wu, Zhen Wu, Zhen Wu, Zhen Wu, Anchun Cheng, Anchun Cheng, Anchun Cheng, Anchun Cheng

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A protocol for identifying universal reference genes within a genus based on RNA-Seq data: a case study of poplar stem gene expression by Qi Xie, Umair Ahmed, Cheng Qi, Kebing Du, Jie Luo, Pengcheng Wang, Bo Zheng, Xueping Shi

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Systematic Investigations of the Huperzine A—Producing Endophytic Fungi of <i>Huperzia serrata</i> in China and Fermentation Optimization Using OSMAC Strategy by Wei Li, Zhicheng Wang, Qiuyu Zhu, Pingfang Tian

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Morphological Analysis, Bud Differentiation, and Regulation of “Bud Jumping” Phenomenon in <i>Oncidium</i> Using Plant Growth Regulators by Hanqiao Lan, Le Liu, Weishi Li, Daicheng Hao, Shanzhi Lin, Beilei Ye, Minqiang Tang, Peng Ling

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Dysfunction in mitochondrial electron transport chain drives the pathogenesis of pulmonary arterial hypertension: insights from a multi-omics investigation by Xin Zhang, Jieling Li, Minyi Fu, Xijie Geng, Junjie Hu, Ke-Jing Tang, Pan Chen, Jianyong Zou, Xiaoman Liu, Bo Zeng

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RnaXtract, a tool for extracting gene expression, variants, and cell-type composition from bulk RNA sequencing by Sophiane G. Bouirdene, Simon Gotty, Mickaël Leclercq, Charles Joly-Beauparlant, Emeric Texeraud, Steve Bilodeau, Arnaud Droit

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Transcriptome-Wide Identification of miRNAs and Their Targets During Riboflavin-Promoted Dormancy Release in <i>Lilium</i> ‘Siberia’ by Xiaoping Xu, Chenglong Yang, Yiping Zheng, Wenjie Guo, Zhongxiong Lai, Shaozhong Fang

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stGRL: spatial domain identification, denoising, and imputation algorithm for spatial transcriptome data based on multi-task graph contrastive representation learning by Xin Lu, Murong Zhou, Bo Gao, Fang Wang, Shuilin Jin, Qiaoming Liu, Guohua Wang

Subjects: “…Spatial transcriptomics…”
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Enhancing TREM2 expression activates microglia and modestly mitigates tau pathology and neurodegeneration by Kai Chen, Fuyao Li, Shuwen Zhang, Yixing Chen, Tadafumi C. Ikezu, Zonghua Li, Yuka A. Martens, Wenhui Qiao, Axel Meneses, Yiyang Zhu, Gisela Xhafkollari, Guojun Bu, Na Zhao

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Emission and Transcriptional Regulation of Aroma Variation in <i>Oncidium</i> Twinkle ‘Red Fantasy’ Under Diel Rhythm by Yan Chen, Shengyuan Zhong, Lan Kong, Ronghui Fan, Yan Xu, Yiquan Chen, Huaiqin Zhong

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Comprehensive Analysis of Hormonal Signaling Pathways and Gene Expression in Flesh Segment Development of Chinese Bayberry (<i>Myrica rubra</i>) by Yihan Fu, Shuwen Zhang, Li Yang, Yu Zong, Yongqiang Li, Xingjiang Qi, Wenrong Chen, Fanglei Liao, Weidong Guo

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Cryo‐X‐Ray Phase Contrast Imaging Enables Combined 3D Structural Quantification and Nucleic Acid Analysis of Myocardial Biopsies by Kan Yan Chloe Li, Petros Syrris, Anne Bonnin, Thomas A Treibel, Vishwanie Budhram‐Mahadeo, Hector Dejea, Andrew C Cook

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Transcriptome Analysis of <i>Aureobasidium pullulans</i> YQ65 Grown on Yeast Extract Peptone Glucose and Potato Dextrose Agar Media and Quantification of Their Effects on Pullulan... by Wan Wang, Jiyun Zhao, Kai Zhang, Zhengran Wang, Jingqiu Ma, Qian Yang, Congyu Lin

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Integration of whole genome resequencing and transcriptome sequencing to identify candidate genes for tall and short traits in Baicheng Fatty chickens by Jiaqi Li, Kaixu Chen, Mengting Zhu, Jingdong Bi, Honggang Tang, Weiyi Gao

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De Novo transcriptome assembly and annotation of the wild service tree Sorbus torminalis (L.) Crantz by Sara Pinosio, Camilla Avanzi, Francesca Bagnoli, Ilaria Spanu, Giovanni Giuseppe Vendramin, Andrea Piotti

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Single-cell analysis reveals the spatiotemporal effects of long-term electromagnetic field exposure on the liver by Mingming Zhang, Zhichun Lv, Lingping Zhao, Quan Zeng, Yunqiang Wu, Junnian Zhou, Jiafei Xi, Xuetao Pei, Haiyang Wang, Changyan Li, Wen Yue

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mNSF: multi-sample non-negative spatial factorization by Yi Wang, Kyla Woyshner, Chaichontat Sriworarat, Genevieve Stein-O’Brien, Loyal A. Goff, Kasper D. Hansen

Subjects: “…Spatial transcriptomics…”
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Comparative Transcriptome Analysis of Gene Responses of Salt-Tolerant and Salt-Sensitive Watermelon Cultivars’ Roots to Salt Stress by Peng Liu, Chao Gao, Shuai Li, Xudong Wang, Yumei Dong, Chongqi Wang, Zigao Jiao, Jianlei Sun

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Single-cell transcriptome of mouse hippocampus identifies neural precursor-like cells, and reveals IL15Rα knock out-mediated neuron remodeling by Yanting Luo, Yadan Nie, Xuemei Huang, Haixia Wang, Zuoli Sun, Jian Yang, Yi He

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Physiological and transcriptional analyses of Arabidopsis primary root growth in response to phosphate starvation under light and dark conditions by Zhen Wang, Mingzhe Xia, Rui Ma, Zai Zheng

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