BRAFV600E maintains the CpG island methylator phenotype, and DNA methylation of PRC2 targets genes in colon cancer by Layla El Bouazzaoui, Jeroen M. Bugter, Emre Küçükköse, André Verheem, Jasmin B. Post, Nicola Fenderico, Inne H.M. Borel Rinkes, Hugo J.G. Snippert, Madelon M. Maurice, Onno Kranenburg

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TIRE-seq simplifies transcriptomics via integrated RNA capture and library preparation by Piper O’Keeffe, Yasmin Nouri, Hui Shi Saw, Zachery Moore, Tracey M. Baldwin, Sam W. Z. Olechnowicz, Jafar S. Jabbari, David McG Squire, Stephen Leslie, Changqing Wang, Yupei You, Matthew E. Ritchie, Ryan S. Cross, Misty R. Jenkins, Cindy Audiger, Shalin H. Naik, James R. Whittle, Saskia Freytag, Sarah A. Best, Peter F. Hickey, Daniela Amann-Zalcenstein, Rory Bowden, Daniel V. Brown

Subjects: “…Transcriptomics…”
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Combined metabolome and transcriptome analysis revealed that MSTN regulated the process of bovine fatty acid metabolism in gut by Li Gao, Yong Ma, Lili Wang, Hao Wu, Ruobing Kang, Guangpeng Li, Lei Yang, Tong Wen

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Spatiotemporal dynamics of early oogenesis in pigs by Wei Ge, Yi-Lin Niu, Yu-Kang Li, Li Li, Han Wang, Wen-Wen Li, Tian Qiao, Yan-Ni Feng, Yu-Qing Feng, Jing Liu, Jun-Jie Wang, Xiao-Feng Sun, Shun-Feng Cheng, Lan Li, Wei Shen

Subjects: “…Spatiotemporal transcriptomics…”
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Cross-species analysis of abiotic stress in hydroponic leafy crops reveals conserved regulatory networks and key divergences by Jia Min Lee, Jia Min Lee, Jong Ching Goh, Eugene Koh, Daniela Mutwil-Anderwald, Marek Mutwil, Marek Mutwil

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Integrated analysis of transcriptome and metabolome revealed clomazone biodegradation in maize seedlings by Guofeng Chen, Jipeng Xu, Jing Wang, Wengong Huang, Feng Liu, Jiannan Dong, Baohai Liu, Dongmei Shi, Aihua Cheng, Hui Liao

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Comprehensive transcriptomic analysis reveals turnip mosaic virus infection and its aphid vector Myzus persicae cause large changes in gene regulatory networks and co-transcription... by Venura Herath, Clare L. Casteel, Jeanmarie Verchot

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Transcriptome and Anthocyanin Profile Analysis Reveals That Exogenous Ethylene Regulates Anthocyanin Biosynthesis in Grape Berries by Min Liu, Boyuan Fan, Le Li, Jinmei Hao, Ruteng Wei, Hua Luo, Fei Shi, Zhiyuan Ren, Jun Wang

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Integrative multi-omics characterization of 12 syngeneic mouse models by Zihan Xu, Binchen Mao, Hengyuan Liu, Shijia Wang, Xiaobo Chen, Sheng Guo

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Integrated Transcriptome and Targeted Metabolome for Resolving Flavonoid Biosynthesis in Figs (<i>Ficus carica Linn</i>.) by Junting Sun, Hadir Yishake, Ming Wang, Hao Zhang, Jie Yan

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De novo assembly of plasmodium interspersed repeat (pir) genes from Plasmodium vivax RNAseq data suggests geographic conservation of sub-family transcription by Timothy S. Little, Deirdre A. Cunningham, George K. Christophides, Adam James Reid, Jean Langhorne

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Integrated analysis of the transcriptome and hormone metabolome elucidates the regulatory mechanisms governing walnut bud germination by Kai Zhao, Xiaofan Wu, Bo Liang, Shuang Gao, Jieyan Yang, Yan Bai, Yaru Wang, Xin Tian, Fang Wang, Xiuqing Yang

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Comprehensive analysis of morphology, transcriptomics, and metabolomics of banana (Musa spp.) molecular mechanisms related to plant height by Junya Wei, Guoyin Liu, Mingzhen Sun, Hao Wang, Ping Yang, Shimin Cheng, Lina Huang, Shouxing Wei, Debing Liu

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Vitamin D exerts endogenous control over TH2 cell fate and immune plasticity by Vrushali D. Fangal, Ayşe Kılıç, Hooman Mirzakhani, Augusto A. Litonjua, Marie B. Demay, Bruce D. Levy, Scott T. Weiss

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Blood transcriptomic associations of epigenetic age in adolescents by Dennis Khodasevich, Anne K Bozack, Saher Daredia, Julianna Deardorff, Kim G Harley, Brenda Eskenazi, Weihong Guo, Nina Holland, Andres Cardenas

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Exploring the utility of snRNA-seq in profiling human bladder tissue: A comprehensive comparison with scRNA-seq by Briana Santo, Emily E. Fink, Alexandra E. Krylova, Yi-Chia Lin, Mohamed Eltemamy, Alvin Wee, Oliver Wessely, Byron H. Lee, Angela H. Ting

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Reduced proteasome activity in the aging brain results in ribosome stoichiometry loss and aggregation by Erika Kelmer Sacramento, Joanna M Kirkpatrick, Mariateresa Mazzetto, Mario Baumgart, Aleksandar Bartolome, Simone Di Sanzo, Cinzia Caterino, Michele Sanguanini, Nikoletta Papaevgeniou, Maria Lefaki, Dorothee Childs, Sara Bagnoli, Eva Terzibasi Tozzini, Domenico Di Fraia, Natalie Romanov, Peter H Sudmant, Wolfgang Huber, Niki Chondrogianni, Michele Vendruscolo, Alessandro Cellerino, Alessandro Ori

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Changes in texture and lignin during different developmental stages of mulberries and transcriptome analysis by WANG Binbin, DAI Xianglong, DU Kaiqun, SHEN Zixin, WANG Hui, GAO Yanxia

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Metabolomics and Transcriptome Analysis of Rapeseed Under Salt Stress at Germination Stage by Menglin Zhou, Xi Song, Qingqing Yu, Bingbing Dai, Wei Zhou, Xiaofei Zan, Wuming Deng

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Integrated transcriptome and proteome analysis identifies keratins as key regulators of corneal scarring in a murine model by Tianyi Zhou, Yuchen Cai, Fei Fang, Xueyao Cai, Yao Fu

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