Integrating physiological and transcriptomic analyses at the single-neuron level by Haruya Yagishita, Takuya Sasaki

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Zwilch kinetochore protein affects the prognosis of cancer patients by participating in cell proliferation, enhancing cell communication, and reshaping the tumor microenvironment by Long Yao, Lianpo Liu, Jinsong Wu, Yunlong Huang, Renquan Zhang, Haoxue Zhang

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Comprehensive pan-cancer analysis indicates key gene of p53-independent apoptosis is a novel biomarker for clinical application and chemotherapy in colorectal cancer by Jianing Yan, Jingzhi Wang, Min Miao, Yongfu Shao

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Spatial transcriptomic analysis of tumor microenvironment in esophageal squamous cell carcinoma with HIV infection by Yuanli Zuo, Yang Jin, Gang Li, Yue Ming, Ting Fan, Yitong Pan, Xiaojun Yao, Yong Peng

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SpaCcLink: exploring downstream signaling regulations with graph attention network for systematic inference of spatial cell–cell communication by Jingtao Liu, Litian Ma, Fen Ju, Chenguang Zhao, Liang Yu

Subjects: “…Spatial transcriptome…”
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Spatial transcriptomic characteristics of gastric cancer in young and the expression and role of TMEM176B in gastric cancer cells by Zhenhua Jiang, Yongfeng Wang, Chi Zhang, Shuangyin Han

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Muscle Spatial Transcriptomic Reveals Heterogeneous Profiles in Juvenile Dermatomyositis and Persistence of Abnormal Signature After Remission by Margot Tragin, Séverine A. Degrelle, Baptiste Periou, Brigitte Bader-Meunier, Christine Barnerias, Christine Bodemer, Isabelle Desguerre, Mathieu Paul Rodero, François Jérôme Authier, Cyril Gitiaux

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Comparative transcriptomic and genomic analysis of tumor cells in the marginal and center regions of tumor nests in human hepatocellular carcinoma by Ziyi Li, Ziyi Li, Yikai Hu, Yikai Hu, Zhuotian He, Heyi Xu, Hongyang Wang, Hongyang Wang, Hongyang Wang, Yufei He

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Spatial transcriptomics reveals Inhba/Smad2/E2f4 axis in Lrp2high thecal cell proliferation in androgen-induced PCOS mice by Man Luo, Man Luo, Xiaona Tian, Li Li, Guomei Zhang, Wenzhi Liu, Linlin Mei, Haoran Li, Xiaoyan You, Dongmei Zhang, Mengsi Zhou, Mengsi Zhou, Cheng Xiao, Cheng Xiao, Jianping Ye, Jianping Ye, Xiaofeng Yang, Xiaofeng Yang

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Combination of spatial transcriptomics analysis and retrospective study reveals liver infection of SARS-COV-2 is associated with clinical outcomes of COVID-19Research in context by Shiqi Chen, Yi Zhang, Asha Ashuo, Shu Song, Lunzhi Yuan, Weixia Wang, Cong Wang, Zunguo Du, Yangtao Wu, Dan Tan, Chenlu Huang, Jingna Chen, Yaming Li, Jinjin Bai, Huilin Guo, Zehong Huang, Yi Guan, Ningshao Xia, Zhenghong Yuan, Jiming Zhang, Quan Yuan, Zhong Fang

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Pyroptosis drives tumor progression and immune evasion in Hepatocellular Carcinoma: a single-cell and spatial transcriptomic study by Siyu Tao, Yunhao Yang

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Editorial: Spatial transcriptome and single-cell sequencing for exploring molecular mechanisms of neuroimmunity and discovering novel markers of neurological diseases by Bowen Wang, Yachen Shi, Chao Cheng, Jian Song, Yuanbo Pan

Subjects: “…spatial transcriptome…”
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Integrative analysis of semaphorins family genes in colorectal cancer: implications for prognosis and immunotherapy by Jiahao Zhu, Benjie Xu, Zhixing Wu, Zhixing Wu, Zhiwei Yu, Shengjun Ji, Jie Lian, Haibo Lu

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Integration of single-cell and spatial transcriptomics by SEU-TCA reveals the spatial origin of early cardiac progenitors by Jingjing He, Yi Yang, Rui Jiang, Yanying Zheng, Xianfa Yang, Xu Jiang, Xin Xue, Zhongzhou Yang, Naihe Jing, Hailong Cao, Zhuojuan Luo, Ke Wei, Peng Xie, Chengqi Lin

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High spatial resolution gene expression profiling and characterization of neuroblasts migrating in the peri-injured cortex using photo-isolation chemistry by Takuya Miyamoto, Kazuya Kuboyama, Mizuki Honda, Mizuki Honda, Yasuyuki Ohkawa, Shinya Oki, Shinya Oki, Kazunobu Sawamoto, Kazunobu Sawamoto

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Multi-transcriptomics reveals niche-specific expression programs and endothelial cells in glioblastoma by Jiukun Hu, Xiaohan Sa, Yue Yang, Yuwen Han, Jie Wu, Minxuan Sun, Shaheryar Shafi, Nafees Ahmad, Sami Siraj, Jiao Yang, Yuanshuai Zhou

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STsisal: a reference-free deconvolution pipeline for spatial transcriptomics data by Yinghao Fu, Yinghao Fu, Yinghao Fu, Leqi Tian, Weiwei Zhang

Subjects: “…spatial transcriptome…”
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Spatial transcriptomics reveal PI3K-AKT and metabolic alterations in aggressive, treatment-resistant lactotroph pituitary neuroendocrine tumors by Florencia Martinez-Mendoza, Sergio Andonegui-Elguera, Ernesto Sosa-Eroza, Erick Gomez-Apo, Aurea Escobar-España, Carolina Gonzalez-Torres, Javier Gaytan-Cervantes, Alam Palma-Guzman, Hugo Torres-Flores, Alberto Moscona-Nissan, Silvia Hinojosa-Alvarez, Jesús Hernandez-Perez, Roció A. Chavez-Santoscoy, Gerardo Guinto, Gerardo Y. Guinto-Nishimura, Blas E. Lopez-Felix, Erick U. Zepeda-Fernandez, Erick M. Estrada-Estrada, Victor Correa-Correa, Pedro A. Gonzalez-Zavala, Marco A. Asenscio-Montiel, Miguel A. Garcia-Vargas, Emmanuel Cantu-Chavez, Rocio L. Arreola-Rosales, Keiko Taniguchi-Ponciano, Daniel Marrero-Rodriguez, Moisés Mercado

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GhLPF1 Associated Network Is Involved with Cotton Lint Percentage Regulation Revealed by the Integrative Analysis of Spatial Transcriptome by Hongyu Wu, Luyao Wang, Shengjun Zhao, Mengtao Gao, Junfeng Cao, Yupeng Hao, Li Yu, Ting Zhao, Siyuan Wang, Jin Han, Yumeng Zhu, Yongyan Zhao, Jie Li, Ke Nie, Kening Lu, Linyun Ding, Zhiyuan Zhang, Tianzhen Zhang, Xueying Guan

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snRNA‐Seq and Spatial Transcriptome Reveal Cell–Cell Crosstalk Mediated Metabolic Regulation in Porcine Skeletal Muscle by Liu Guo, Mengmeng Han, Junfei Xu, Wenyue Zhou, Hanjing Shi, Sisi Chen, Weijun Pang, Xing Zhang, Yehui Duan, Yulong Yin, Fengna Li

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