Computational analysis of SARS-CoV-2, SARS-CoV, and MERS-CoV genome using MEGA by Vipan Kumar Sohpal

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Multidimensional library for the improved identification of per- and polyfluoroalkyl substances (PFAS) by Kara M. Joseph, Anna K. Boatman, James N. Dodds, Kaylie I. Kirkwood-Donelson, Jack P. Ryan, Jian Zhang, Paul A. Thiessen, Evan E. Bolton, Alan Valdiviezo, Yelena Sapozhnikova, Ivan Rusyn, Emma L. Schymanski, Erin S. Baker

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Effectiveness of the PSI BLAST algorithm in dependence on scanning word size by Mindaugas Margelevičius, Albertas Timinskas

“…We asses the feasibility to modify NCBI (National Center for Biotechnology Information) PSI-BLAST implementation. …”
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Introduction to BLAH5 special issue: recent progress on interoperability of biomedical text mining by Jin-Dong Kim, Kevin Bretonnel Cohen, Nigel Collier, Zhiyong Lu, Fabio Rinaldi

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Editor’s introduction to the special issue of the 6th Biomedical Linked Annotation Hackathon (BLAH6) by Jin-Dong Kim, Kevin Bretonnel Cohen, Fabio Rinaldi, Zhiyong Lu, Nigel Collier, Hyun-Seok Park

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Love Addiction - Current Diagnostic and Therapeutic Paradigms in Clinical Psychology. by Marilena Giovanna Maglia, Ines Lanzafame, Maria C Quattropani, Pasquale Caponnetto

“… # Methods From 30 November 2021 to July 2022 a review was conducted aimed at identifying the current diagnostic paradigms associated with this new behavioral dependence, investigating in depth what has not yet emerged, searching for strong and weak correlations with related theoretical constructs, comorbidities, investigate which evaluation scales are currently used and outline a guiding design that allows you to move between current scientific discoveries, searching for relevant studies in the databases PubMed, National Center for Biotechnology Information (NCBI), PsycINFO, MDPI, APA, ScienceDirect, and ReserchGate…”
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Compiling Multicopy Single-Stranded DNA Sequences from Bacterial Genome Sequences by Wonseok Yoo, Dongbin Lim, Sangsoo Kim

“…Based on the conserved features in the eight known msDNA sequences, we developed a detection method and applied it to scan National Center for Biotechnology Information (NCBI) RefSeq bacterial genome sequences. …”
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Detection of new single nucleotide polymorphisms in plasma cells carcinoma (myeloma) by polymerase chain reaction–single strand conformation polymorphism and sequencing technical m... by Sarah K. Obayes, Sabah H. Enayah, Shaimaa A. Al-Oubaidy, Rana A. Ghaleb

“…Results: The genotypes obtained in this experiment verified that several single nucleotide polymorphisms were obtained between 5-band and 6-band miRNA National center for biotechnology information Primer3 plus reference. …”
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Gene expression dataset of the blood clam Anadara kagoshimensis in relation to anoxic stressDDBJ by Kaito Hatano, Ryo Orita, Kei Kimura, Yukio Nagano, Nobuo Suzuki

“…These RNA-seq data offer valuable insights into the adaptation mechanisms of A. kagoshimensis to anoxic environments and are accessible from the National Center for Biotechnology Information (NCBI) database under BioProject accession number PRJDB19614.…”
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Data Mining Mycobacterium tuberculosis Pathogenic Gene Transcription Factors and Their Regulatory Network Nodes by Guangxin Yuan, Yu Bai, Yuhang Zhang, Guangyu Xu

“…In this study, using the National Center for Biotechnology Information (NCBI) GEO Datasets, whole blood gene expression profile data were obtained in patients with active pulmonary tuberculosis. …”
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Rab7 Investigation Insights into the Existence of White Spot Syndrome Virus in Crustaceans: An In Silico Approach by Mehedi Mahmudul Hasan, M. Nazmul Hoque, Md Robiul Hasan, Mohammad Asaduzzaman, Farha Matin Juliana

“…In this study, previously published Rab7 sequences from National Center for Biotechnology Information (NCBI) have been investigated from chordates, mollusks, annelids, cnidarians, amphibians, priapulids, brachiopods, and arthropods including decapods and other groups. …”
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A case report of infantile fibrosarcoma with BRAF gene mutation with incomplete intestinal obstruction by Fan Zhu, Liang Fan, Guanhua Cui, Hai Jian, Hongjie Zhou, Jianfeng Xu, Fengshun Chen

“…ObjectiveThis study aims to explore the clinical features, diagnosis, and treatment of infantile fibrosarcoma (IFS) associated with BRAF mutations, with the goal of enhancing clinicians’ understanding of this rare genetic variant and its relationship to IFS.MethodsThe China National Knowledge Infrastructure (CNKI), Wanfang Database, VIP Database, PubMed, and National Center for Biotechnology Information (NCBI) were searched using the keywords “infantile fibrosarcoma” and “congenital fibrosarcoma” for relevant articles published before August 2024. …”
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Fungal genomes: suffering with functional annotation errors by Tapan Kumar Mohanta, Ahmed Al-Harrasi

“…Abstract Background The genome sequence data of more than 65985 species are publicly available as of October 2021 within the National Center for Biotechnology Information (NCBI) database alone and additional genome sequences are available in other databases and also continue to accumulate at a rapid pace. …”
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Detection of plasmids in Salmonella from poultry and investigating the potential horizontal transfer of antimicrobial resistance and virulence genes by Haijiao Lin, Moussa S. Diarra, Guangqiang Jia, Xin Zhao

“…Both PlasmidFinder 2.1 and VRprofile2 were employed to detect plasmids in Salmonella sequences downloaded from the National Center for Biotechnology Information (NCBI) Reference Sequences (RefSeq) database, and then oriTfinder was used to determine the conjugative ability of plasmids. …”
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Characterisation of Fourteen Accessions of Trichosanthes cucumerina from Nigeria Using Internal Transcribed Spacer by Ann Osuagwu, Celestine Uzoma Aguoru, Lucky Osabuohien Omoigui, Joseph Olalekan Olasan

“…This was blasted on the National Center for Biotechnology Information (NCBI) website. The sequenced blast in the NCBI data website was to be similar to accession numbers GU059528.1 and GQ240883.1 respectively. …”
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Druggability and molecular docking of essential secondary metabolites from Azadirachta indica leaf against angiotensin converting enzyme-2: Covid-19 in focus by Paul Chijioke Ozioko, Ukamaka Owohetete, Daniel Danladi Gaiya

“…Through a literature survey and database mining of known compounds from A. indica in the National Center for Biotechnology Information (NCBI) database, 12 secondary metabolites and 5 FDA COVID-19-approved drugs were identified. …”
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Neurofilament light chain levels in neuronal surface antibody-associated autoimmune encephalitis: a systematic review and meta-analysis by Qi-Lun Lai, Meng-Ting Cai, Er-Chuang Li, Gao-Li Fang, Chun-Hong Shen, Yong-Feng Xu, Song Qiao, Jia-Jia Wang, Qin-Jie Weng, Yin-Xi Zhang

“…Methods The National Center for Biotechnology Information (NCBI, PubMed), Web of Knowledge, and the Cochrane Library databases were searched for studies reporting NfL levels in patients with NSAE. …”
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Characterisation of EfbA from the Endodontic Pathogen Enterococcus faecalis and Prediction of Immunodominant EfbA Epitope Peptides: An In-vitro and In-silico Study by Dev Arora, AS Smiline Girija, J Vijayashree Priyadharsini

“…The EfbA protein was retrieved from the National Center for Biotechnology Information (NCBI) database, after which prediction of antigenicity and allergenicity was performed via the VaXiJen and Algpred servers, respectively. …”
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How to publish a new fungal species, or name, version 3.0 by M. Catherine Aime, Andrew N. Miller, Takayuki Aoki, Konstanze Bensch, Lei Cai, Pedro W. Crous, David L. Hawksworth, Kevin D. Hyde, Paul M. Kirk, Robert Lücking, Tom W. May, Elaine Malosso, Scott A. Redhead, Amy Y. Rossman, Marc Stadler, Marco Thines, Andrey M. Yurkov, Ning Zhang, Conrad L. Schoch

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