Complete assembly of the organellar genome of Rubroshorea johorensis utilizing advanced long-read sequencing technologies by Aditya Nugroho, Evayusvita Rustam, Nurin Widyani, Fitri Indriani, Dede J. Sudrajat, Mohammad Agus Salim, Muhammad Majiidu, Fifi Gus Dwiyanti, Fifi Gus Dwiyanti, Rahadian Pratama, Rahadian Pratama, Iskandar Z. Siregar, Iskandar Z. Siregar

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Custom barcoded primers for influenza A nanopore sequencing: enhanced performance with reduced preparation time by Iryna V. Goraichuk, David L. Suarez

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Improved influenza A whole-genome sequencing protocol by Iryna V. Goraichuk, Jacquline Risalvato, Mary Pantin-Jackwood, David L. Suarez

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Comparative genomic study of the Penicillium genus elucidates a diverse pangenome and 15 lateral gene transfer events by Celine Petersen, Trine Sørensen, Mikkel R. Nielsen, Teis E. Sondergaard, Jens L. Sørensen, David A. Fitzpatrick, Jens C. Frisvad, Kåre L. Nielsen

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Diagnostic accuracy of nanopore sequencing for detecting Mycobacterium tuberculosis and drug-resistant strains: a systematic review and meta-analysis by Timothy Hudson David Culasino Carandang, Dianne Jaula Cunanan, Gail S. Co, John David Pilapil, Juan Ignacio Garcia, Blanca I. Restrepo, Marcel Yotebieng, Jordi B. Torrelles, Kin Israel Notarte

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Metabarcoding using nanopore sequencing enables identification of diverse and zoonotic vector-borne pathogens from neglected regions: A case study investigating dogs from Bhutan by Lucas G. Huggins, Ugyen Namgyel, Pelden Wangchuk, Ushani Atapattu, Rebecca Traub, Vito Colella

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Metabarcoding with Illumina and Oxford Nanopore Technologies provides complementary insights into tree seed mycobiota by Jana Mittelstrass, Renate Heinzelmann, René Eschen, Martin Hartmann, Quirin Kupper, Salome Schneider, Simone Prospero, Iva Franić

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Mycobiome of low maintenance iconic landscape plant boxwood under repeated treatments of contact and systemic fungicides by Xiaoping Li, Ginger Hemmings, Olanike Omolehin, Hsien Tzer Tseng, Amanda Taylor, Chad Taylor, Ping Kong, Fred Gouker, Chuanxue Hong

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Universal amplification and sequencing of foot-and-mouth disease virus complete genomes using nanopore technology by Andrew E. Shaw, Kebaneilwe Lebani, Lina González Gordon, Ugonna E. Ihearahu, Jemma Wadsworth, Hayley M. Hicks, Noemi Polo, Graham Freimanis, Dennis Muhanguzi, Chandana Tennakoon, Richard J. Orton, Nick J. Knowles, Antonello Di Nardo, Ryan A. Waters, Barend MdeC Bronsvoort, Donald P. King

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Towards Improved Nepovirus Detection and Identification in Xiphinema Nematodes by Ellen A. Everaert, Nicole Viaene, Paul Quataert, Annelies Haegeman, Kris De Jonghe

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Species- and strain-level assessment using rrn long-amplicons suggests donor’s influence on gut microbial transference via fecal transplants in metabolic syndrome subjects by Alfonso Benítez-Páez, Annick V. Hartstra, Max Nieuwdorp, Yolanda Sanz

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A rapid approach to profiling diverse fungal communities using the MinION™ nanopore sequencer by Korena K Mafune, Bruce J Godfrey, Daniel J Vogt, Kristiina A Vogt

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Development of a culture-independent whole-genome sequencing of Nipah virus using the MinION Oxford Nanopore platform by Md. Mahfuzur Rahman, Mojnu Miah, Mohammad Enayet Hossain, Samiur Rahim, Sharmin Sultana, Syed Moinuddin Satter, Ariful Islam, Shannon L. M. Whitmer, Jonathan H. Epstein, Christina F. Spiropoulou, John D. Klena, Tahmina Shirin, Joel M. Montgomery, Maria E. Kaczmarek, Mohammed Ziaur Rahman, Iqbal Kabir Jahid

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Development and Evaluation of a MinION Full-Length 16S rDNA Sequencing Analysis Pipeline for Rapid Diagnosis of Animal Gastrointestinal Diseases by Ying Zhong, Qingyun Pan, Yu Wang, Jinyan Yu, Yaomen Li, Lifang Gu, Meicun Hou, Shenglong Liang, Jia Guo, Xinan Jiao, Yunzeng Zhang

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Carriage and within-host diversity of mcr-1.1-harbouring Escherichia coli from pregnant mothers: inter- and intra-mother transmission dynamics of mcr-1.1 by Sharmi Naha, Priyanka Basak, Kirsty Sands, Rebecca Milton, Maria J. Carvalho, Shravani Mitra, Amrita Bhattacharjee, Anuradha Sinha, Suchandra Mukherjee, Bijan Saha, Pinaki Chattopadhyay, Partha Sarathi Chakravorty, Ranjan Kumar Nandy, Shanta Dutta, Timothy R. Walsh, Sulagna Basu

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