Verrucomicrobium spinosum essential genome and the divergence of cell division in the PVC superphylum by Valentina Henriques, David Moyano-Palazuelo, Maria Teresa Alonso-Pascual, Manuel Pazos, Damien P. Devos, Elena Rivas-Marin

Subjects: “…Microbial genomics…”
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Metagenomics identification of genetically distinct tick virome in India unveils signs of purifying selection, and APOBEC and ADAR editing by Perumal Arumugam Desingu, Selvarayar Arunkumar, Kumaresan Nagarajan, G. Saikumar

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Phenotypic and in silico characterization of carbapenem-resistant Serratia marcescens clinical strains by Anelise Stella Ballaben, Otávio G.G. de Almeida, Joseane Cristina Ferreira, Doroti de Oliveira Garcia, Yohei Doi, Robert K. Ernst, Marcia R. von Zeska Kress, Ana Lúcia da Costa Darini

Subjects: “…Microbial genomics…”
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Inference of antimicrobial resistance (AMR) from a whole genome database outperforming AMR gene detection by Pornsawan Cholsaktrakool, Kornthara Kawang, Nicha Sangpiromapichai, Pannaporn Thongsuk, Songtham Anuntakarun, Pattapon Kunadirek, Natthaya Chuaypen, Sumanee Nilgate, Naris Kueakulpattana, Ubolrat Rirerm, Tanittha Chatsuwan, Elita Jauneikaite, Frances Davies, Ploy N. Pratanwanich, Sira Sriswasdi, Voraphoj Nilaratanakul

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Genomic evidence of symbiotic adaptations in fungus-associated bacteria by Daniyal Gohar, Kadri Põldmaa, Mari Pent, Saleh Rahimlou, Klara Cerk, Duncan Y.K. Ng, Falk Hildebrand, Mo Bahram

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Genomic insights into biosynthesis and adaptation in the bioactive marine bacterium Streptomyces albidoflavus VIP-1 from the Red Sea by Abdelrahman M. Sedeek, Hossam Elfeky, Amro S. Hanora, Samar M. Solyman

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Regulatory orchestration of FK506 biosynthesis in Streptomyces tsukubaensis NRRL 18488 revealed through systematic analysis by Namil Lee, Woori Kim, Ji Hun Kim, Yongjae Lee, Soonkyu Hwang, Gahyeon Kim, Hyeseong Kim, Qingyun Dan, Matthias Schmidt, Yeo Joon Yoon, Suhyung Cho, Bernhard Palsson, Jay D. Keasling, Byung-Kwan Cho

Subjects: “…Microbial genomics…”
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Compression rates of microbial genomes are associated with genome size and base composition by Jon Bohlin, John H.-O. Pettersson

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Machine learning reveals the dynamic importance of accessory sequences for Salmonella outbreak clustering by Chao Chun Liu, William W. L. Hsiao

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Microbial partner (MiPner) analysis by Jeffrey L. Bennetzen, Josue Fernandez-Canela, Vienna Elmgreen, Shaugnessy R. McCann, Mary E. Norris, Xiangyu Deng, Philip Brailey-Crane

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Enabling Access to Novel Bacterial Biosynthetic Potential From ONT Draft Genomic Data by Marco A. Campos‐Magaña, Vitor A. P. Martins dos Santos, Luis Garcia‐Morales

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Flowtigs: Safety in flow decompositions for assembly graphs by Francisco Sena, Eliel Ingervo, Shahbaz Khan, Andrey Prjibelski, Sebastian Schmidt, Alexandru Tomescu

Subjects: “…Microbial genomics…”
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Staphylococcus haemolyticus is a reservoir of antibiotic resistance genes in the preterm infant gut by Lisa E. Lamberte, Elizabeth M. Darby, Raymond Kiu, Robert A. Moran, Antia Acuna-Gonzalez, Kathleen Sim, Alexander G. Shaw, J. Simon Kroll, Gusztav Belteki, Paul Clarke, Heather Felgate, Mark A. Webber, William Rowe, Lindsay J. Hall, Willem Van Schaik

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High genetic relatedness between multidrug resistant bacteria before and after the 2022 invasion of Ukraine by Francois Lebreton, Viacheslav Kondratiuk, Valentyn Kovalchuk, Niels Pfennigwerth, Ting L. Luo, Brendan T. Jones, Nadiia Fomina, Frieder Fuchs, Jörg B. Hans, Jessica Eisfeld, Ana Ong, Sören Gatermann, Jason W. Bennett, Patrick Mc Gann

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KPop: accurate and scalable comparative analysis of microbial genomes by sequence embeddings by Xavier Didelot, Paolo Ribeca

Subjects: “…Microbial genomics…”
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NanoCore: core-genome-based bacterial genomic surveillance and outbreak detection in healthcare facilities from Nanopore and Illumina data by Sebastian A. Fuchs, Lisanna Hülse, Teresa Tamayo, Susanne Kolbe-Busch, Klaus Pfeffer, Alexander T. Dilthey

Subjects: “…microbial genomics…”
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Eukfinder: a pipeline to retrieve microbial eukaryote genome sequences from metagenomic data by Dandan Zhao, Dayana E. Salas-Leiva, Shelby K. Williams, Katherine A. Dunn, Jason D. Shao, Andrew J. Roger

Subjects: “…eukaryotic microbial genomes…”
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Genome sequencing of a novel Verticillium dahliae strain (huangweibingjun) by Vincent Ninkuu, Zhixin Liu, Hao Liu, Chunyang Li, Yaping Zhou, Qianli Zhao, Aizhi Qin, Mengfan Li, Peibo Gao, Lulu Yan, Xiao Song, Luyao Kong, Yajie Xie, Enzhi Guo, Xuwu Sun

Subjects: “…Microbial genome…”
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The ever-evolving world of microbes: the current state of microbial taxonomy, genome evolutionary dynamics, and the potential impact on the future of agricultural microbials risk a... by Katherine A. Karberg

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