Hi–C interaction graph analysis reveals the impact of histone modifications in chromatin shape by Emre Sefer

Subjects: “…Hi–C…”
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Influence of human peripheral blood samples preprocessing on the quality of Hi-C libraries by M. M. Gridina, E. Vesna, M. E. Minzhenkova, N. V. Shilova, O. P. Ryzhkova, L. P. Nazarenko, E. O. Belyaeva, I. N. Lebedev, V. S. Fishman

Subjects: “…hi-c…”
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DeCGR: an interactive toolkit for deciphering complex genomic rearrangements from Hi-C data by Junping Li, Minghui Sun, Yusen Ye, Lin Gao

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A mini-review of single-cell Hi-C embedding methods by Rui Ma, Jingong Huang, Tao Jiang, Wenxiu Ma

Subjects: “…Single-cell Hi-C…”
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Enhancers and genome conformation provide complex transcriptional control of a herpesviral gene by David W Morgens, Leah Gulyas, Xiaowen Mao, Alejandro Rivera-Madera, Annabelle S Souza, Britt A Glaunsinger

Subjects: “…Capture Hi-C…”
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INVESTIGATION OF THE SPATIAL GENOME ORGANIZATION OF MOUSE SPERM AND FIBROBLASTS BY THE Hi-C METHOD by N. R. Battulin, V. S. Fishman, A. A. Khabarova, M. Yu. Pomaznoy, T. A. Shnaider, D. A. Afonnikov, O. L. Serov

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ProbC: joint modeling of epigenome and transcriptome effects in 3D genome by Emre Sefer

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3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS by N. R. Battulin, V. S. Fishman, Yu. L. Orlov, A. G. Menzorov, D. A. Afonnikov, O. L. Serov

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Chromosome‐Level Genome Assembly for the Chinese Serow (Capricornis milneedwardsii) Provides Insights Into Its Taxonomic Status and Evolution by Anning Li, Qimeng Yang, Rongrong Li, Keli Cai, Li Zhu, Xiaoyu Wang, Gong Cheng, Xihong Wang, Yinghu Lei, Yu Jiang, Linsen Zan

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A chromosome-scale genome assembly of mungbean (Vigna radiata) by Supaporn Khanbo, Poompat Phadphon, Chaiwat Naktang, Duangjai Sangsrakru, Pitchaporn Waiyamitra, Nattapol Narong, Chutintorn Yundaeng, Sithichoke Tangphatsornruang, Kularb Laosatit, Prakit Somta, Wirulda Pootakham

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Using genomics to explore the epidemiology of vancomycin resistance in a sewage system by Emilie Egholm Bruun Jensen, Saria Otani, Ivan Liachko, Benjamin Auch, Frank M. Aarestrup

Subjects: “…Hi-C…”
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A Bioconductor/R Workflow for the Detection and Visualization of Differential Chromatin Loops [version 1; peer review: 2 approved] by Eric Davis, JP Flores, Michael I Love, Douglas H Phanstiel, Nicole Kramer

Subjects: “…Hi-C…”
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Chromosome-level assembly of the Clinopodium gracile genome by Yubang Gao

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Benchmarking of Hi-C tools for scaffolding plant genomes obtained from PacBio HiFi and ONT reads by Lia Obinu, Lia Obinu, Urmi Trivedi, Andrea Porceddu

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A chromosome-level genome assembly of a model conifer plant, the Japanese cedar, Cryptomeria japonica D. Don by Takeshi Fujino, Katsushi Yamaguchi, Toshiyuki T. Yokoyama, Toshiya Hamanaka, Yoritaka Harazono, Hiroaki Kamada, Wataru Kobayashi, Tokuko Ujino-Ihara, Kentaro Uchiyama, Asako Matsumoto, Ayako Izuno, Yoshihiko Tsumura, Atsushi Toyoda, Shuji Shigenobu, Yoshinari Moriguchi, Saneyoshi Ueno, Masahiro Kasahara

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Mapping the 3D genome architecture by Ghazaleh Tavallaee, Elias Orouji

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Aberrant c-AMP signalling in richter syndrome revealed by single-cell transcriptome and 3D chromatin analysis by Heng Li, Cheng Xing, Ji Li, Yihao Zhan, Ming Luo, Peilong Wang, Yue Sheng, Hongling Peng

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