COMPARISON OF THE COMPLETE NUCLEOTIDE SEQUENCES OF MITOCHONDRIAL DNA FROM WISTAR AND OXYS RAT STRAINS MAINTAINED AT THE INSTITUTE OF CYTOLOGY AND GENETICS SB RAS by R. A. Maksyutov, E. V. Gavrilova, T. S. Nepomniashchikh, U. N. Rotskaya, P. S. Loshchenova, N. G. Kolosova, O. I. Sinitsyna, S. N. Shchelkunov

“…The nucleotide sequences were submitted to GenBank. It was shown that two additional unique nucleotide substitutions between rats OXYS (ICG) and Wistar (ICG) were absent from other known nucleotide sequences of rat mitochondrial DNA of rats and that they did not cause amino acid substitutions, so that all phenotypic differences between the lines were determined only by differences in their nuclear DNA. …”
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Molecular Identification of Fungal Communities in a Soil Cultivated with Vegetables and Soil Suppressiveness to Rhizoctonia solani by Silvana Pompéia Val-Moraes, Eliamar Aparecida Nascimbem Pedrinho, Eliana Gertrudes Macedo Lemos, Lucia Maria Carareto-Alves

“…The plasmid inserts were sequenced and compared to known rDNA sequences in the GenBank database. Of the sequenced clones, 22 were obtained from the SMS sample, 18 from the SHC sample, and 6 from the STC sample. …”
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Development of Genomic Simple Sequence Repeat Markers for Evaluating Resources of Armillaira ostoyae and Their Transferability to Armillaira gallica by Sohee Kim, Hwayong Lee

“…SSR markers were developed using the released A. ostoyae whole-genome sequence (GenBank assembly accession: GCA_900157425.1). The SSR regions were analyzed using the MISA (MIcroSAtellite identification tool) program. …”
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Morphological Diversity of Gracilaria blodgettii Harvey 1853 (Gracilariaceae, Rhodophyta) from Sarawak, Malaysian Borneo by Ruhana Hassan, Muhammad Nur Arif Othman, Mohd Nasarudin Harith, Amir Shah Ruddin Md Sah

“…However, based on 672 bp CO1-5P gene sequence analysis, all the three species were identified as G. blodgettii; besides, low genetic divergence values (0.17%–0.34%) were scored between samples in this study with the same species in GenBank. In the phylogenetic trees, all samples in this study group together with other G. blodgettii have high bootstrap values; thus, this species is monophyletic. …”
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Antibiotic resistance gene occurrence in poultry farms in northeast Brazil by Henrique Francisco de Almeida, Paulo Ricardo Conceição Marques Trindade, César Roberto Viana Teixeira, Claudson Oliveira Brito, Silvio Santana Dolabella, Sona Jain, Maíra Pompeu Martins, Ana Andréa Barbosa

“…Sequencing and comparison with the GenBank database confirmed the identity of the ARGs. …”
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A Comprehensive Genetic Analysis of Mycotoxin-Producing Penicillium expansum Isolated from River Water Using Molecular Profiling, DNA Barcoding, and Secondary Structure Prediction by R. Ravikiran, G. Raghu and B. Praveen

“…This sequence was officially cataloged as OR536221 in the NCBI GenBank database. Sequence and phylogenetic assessments were conducted to pinpoint the strain and geographical origin. …”
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Clinical signs, molecular detection and phylogenetic analysis of sheep and goat pox viruses in sheep in Mosul city, Iraq by Mohammad A. Altaliby, Sadam D. Hasan, Thabit M. Omar, Qaes T. Alsarhan

“…Two sequences were recorded under the accession numbers (PP992317.1 and PP992318.1) in the GenBank. The outcomes indicate that the study sequence was analogous to those of Iraq, India, Germany (99.89% identity) and Russia (99.79% identity). …”
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Diversity of Stemphylium spp. of onion and garlic revealed the differential pathogenicity and in vitro efficacy of different growth suppressors by Md. Morshedul Islam, Sabmira Showkat Silvi, Shila Chakraborty, Md. Atiqur Rahman Khokon

“…Further, all PCR products were sequenced to find the homology with the GenBank accessions of NCBI. Different isolates showed 82.92–100.00 % similarity with S. vesicarium and S. lycopersici. …”
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Analysis of the Complete Genomes of Enterovirus 71 Subtypes in China by Lei Wang, Yuzhu Dai, Jun Cheng, Changgui Sun, Yu Chen, Dawei Cui

“…Here, the complete genomes of EV-A71 from China between 1998 and 2019 were downloaded from GenBank. The phylogenetic trees were developed by MEGA7.0 software, and the complete genetic epidemiological characteristics and amino acid mutations of EV-A71 from China were also analysed. …”
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Clinico¬pathological features and phylogenetic analysis of rabies infection in local Iraqi breed cattle by M. H. Hussain, Kh. A. Mansour, S. A. A. Al-Redah, A. J. Abid

“…The phylogenetic analysis revealed variations at a total of 24 places in multiple sequence alignments between two field rabies virus nucleotide sequences from the current investigation (>MW893685 and >MW893684) and 48 GenBank nucleotide sequences, including the reference strain (>NC_001542). …”

New taxa and a combination in Glomerales (Glomeromycota, Glomeromycetes) by Janusz Błaszkowski, Szymon Zubek, Paweł Milczarski, Ryszard Malinowski, Piotr Niezgoda, Bruno Tomio Goto

“…Dominikia indica strain 211 was previously characterized only by sequences of the 45S nuc rDNA region (= 18S, partial, ITS-1-5.8S-ITS2, 28S, partial) and the rpb1 gene (without any morphological data) that were deposited in GenBank under the incorrect name “Dominikia indica strain 211”. …”
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First Investigation of the Marine Gastrotrich Fauna from the Waters of North Tunisia, with the Description of a New Species of <i>Halichaetonotus</i> (Gastrotricha, Chaetonotida) by Aicha Souid, Mehrez Gammoudi, Francesco Saponi, M’hamed El Cafsi, M. Antonio Todaro

“…We explicitly address and correct the errors in GenBank concerning the attribution of gene sequences for these species.…”
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Gene Expression Analysis of Deduced Protein Sequence from the FLOWERING LOCUS C (FLC) Homolog during Vegetative and Reproductive Phases in Lepidium sativum L. by Parissa Jonoubi, Farkhondeh Rezanejad, Fatemeh Mahyapoor

“…Specific primers were designed for the RT-PCR assays, amplifying a 361-nucleotide fragment of the LsFLC gene, recorded in the NCBI database under the accession number GenBank: KT582105.1. The sequenced fragment encoded for a deduced protein sequence of 120 amino acids. …”
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Phylogenetic analysis of dermatophytes isolated from small domestic animals by A. M. Smagulova, E. V. Kukhar, T. I. Glotova, A. G. Glotov

“…The fungal isolate species were confirmed by sequencing using two rDNA internal transcribed spacer (ITS) primer pairs, and this allowed for their deposition to the GenBank database. Based on the sequencing results, Microsporum canis (12 strains) and Trichophyton benhamiae (2 strains) were identified. …”
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Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.) by Jonggeun Kim, Bosung Choi, Young-Hwan Park, Byoung-Kwan Cho, Hyoun-Sub Lim, Savithiry Natarajan, Sang-Un Park, Hanhong Bae

“…The full-length F5H ortholog consists of a 1,557-bp open reading frame (ORF) encoding 518 amino acids (GenBank Accession number JX524278). The deduced amino acid sequence showed that kenaf F5H had the highest similarity (78%) with that of Populus trichocarpa. …”
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Molecular Identification of Fusarium proliferatum from toenails: A case report by Sazan Jamal Gharib, Nawroz Abdul-razzak Tahir

“…For final identification sequencing of DNA has been carried out by [Macrogen Korea] using forward primer ITS1, The obtained consensus of query sequence was compared with the ITS DNA database on the BLAST homepage, aligned and diagnosed strain deposited to the GenBank and we received an accession number (MK112619). …”
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Molecular Detection and Phylogenetic Analysis of the alkB Gene in Klebsiella oxytoca Strains Isolated from the Gut of Tenebrio molitor by Tsitsi Lynn Mupamhadzi, Oleen Machona, Farisai Chidzwondo, Rumbidzai Mangoyi

“…To detect the presence of the alkB gene in the isolated bacterial strains, a set of primers used in the amplification of this gene was manually designed from the conserved regions of the alkB nucleotide sequences of eleven bacterial species from GenBank. TCOFFE online tool was used to align the alkB sequences of the bacteria, while Jalview and ConSurf were used to view the alignment. …”
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Ex Situ Conservation, DNA Barcoding and Enzymatic Potential Evaluation of Macrofungi (Basidiomycota, Ascomycota) from Vietnam by Nadezhda V. Psurtseva, Anna A. Kiyashko, Svetlana V. Senik, Thi Ha Giang Pham

“…From 2012 to 2023, 785 strains of macrofungi from National Parks of Vietnam were preserved in the LE-BIN collection, 327 of which were barcoded with the sequences deposited in the NCBI GenBank. A taxonomic analysis demonstrated that many of the preserved isolates are potentially new or poorly studied species, representing a useful resource for taxonomical studies and a search for new medicinal mushrooms. …”
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Prevalence and phylogenetic analysis of Mycobacterium avium subsp. paratuberculosis in cattle in Mosul city, Iraq by Sadam D. Hasan, Mohammad A. Altaliby, Amer H. Taha, Karam M. Abdulrazzaq

“…Furthermore, in this study, two sequences of Mycobacterium avium subsp. paratuberculosis were deposited in GenBank (PP976335.1 and PP976335.1); phylogenetically the study strains showed 100% identity near MAP strain in Saudi Arabia under the accession number (MN928512.1) and 99.85% identity with Spain, Germany and South Korea strain accession numbers (FJ775181.1, CP053068.1 and CP033909.1) respectively. …”
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Complete genome sequence of Pseudarthrobacter sp. NIBRBAC000502770 from coal mine of Hongcheon on Republic of Korea by Min-Kyu Park, Yeong-Jun Park, Myung-Suk Kang, Min-Ha Kim, Soo-Young Kim, Jae-Ho Shin

“…The genome and plasmid are available in GenBank (CP041198.1, CP014497.1), offering insights into bioremediation and plant growth in metal-contaminated environments.…”
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