Benchmarking biomolecular force fields for molecular dynamics simulations of native fold and enzymatic activity of SARS-CoV-2 papain-like protease
The papain-like protease (PLpro) of the SARS-CoV-2 coronavirus is crucial for viral processing and disrupting the immune response. Therefore, it is a promising target for treating acute COVID-19 infection. Computational chemistry tools, such as molecular docking and molecular dynamics (MD) simulatio...
Saved in:
| Main Authors: | Kateryna O. Lohachova, Alexander Kyrychenko, Oleg N. Kalugin |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2025-07-01
|
| Series: | Heliyon |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2405844025019644 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
-
Flavonoids Derived from the Roots of <i>Lespedeza bicolor</i> Inhibit the Activity of SARS-CoV Papain-like Protease
by: Hyun Sim Woo, et al.
Published: (2024-11-01) -
Virtual Screening and Inhibition of Middle East Respiratory Syndrome Coronavirus Replication by Targeting Papain-like Protease
by: Mahmoud Kandeel, et al.
Published: (2021-10-01) -
The Virtual Screening and Molecular Docking Study of New Inhibitors for SARS-COV-2 Papain-Like Protease (PLpro)
by: Necmettin Pirinççioğlu, et al.
Published: (2025-05-01) -
Integrating Molecular Dynamics, Molecular Docking, and Machine Learning for Predicting SARS-CoV-2 Papain-like Protease Binders
by: Ann Varghese, et al.
Published: (2025-07-01) -
Statine-based peptidomimetics as SARS-CoV-2 Papain-like protease inhibitors: in Silico and in vitro studies
by: Raiane Dandara Pereira Pimentel, et al.
Published: (2025-07-01)