Quantifying the intra- and inter-species community interactions in microbiomes by dynamic covariance mapping

Abstract A microbiome’s composition, stability, and response to perturbations are governed by its community interaction matrix, typically quantified through pairwise competition. However, in natural environments, microbes encounter multispecies interactions, complex conditions, and unculturable memb...

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Bibliographic Details
Main Authors: Melis Gencel, Gisela Marrero Cofino, Cang Hui, Zahra Sahaf, Louis Gauthier, Chloé Matta, David Gagné-Leroux, Derek K. L. Tsang, Dana P. Philpott, Sheela Ramathan, Alfredo Menendez, Shimon Bershtein, Adrian W. R. Serohijos
Format: Article
Language:English
Published: Nature Portfolio 2025-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-61368-y
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