Genetic characterization of measles virus circulating in Iran, 2021–2023

Abstract Background Measles, an ongoing public health concern, demands continuous molecular surveillance and virus characterization for elimination. Despite Iran achieving measles elimination status in 2019 through robust molecular testing and vaccination, the COVID-19 pandemic disrupted global vacc...

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Main Authors: Alireza Esmaeiloghli Amiryli, Simin Abbasi, Faezeh Tarpoor, Azadeh Shadab, Azam Saboori, Nazanin-Zahra Shafiei Jandaghi, Vahid Salimi, Talat Mokhtari-Azad
Format: Article
Language:English
Published: BMC 2025-01-01
Series:BMC Infectious Diseases
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Online Access:https://doi.org/10.1186/s12879-025-10473-w
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author Alireza Esmaeiloghli Amiryli
Simin Abbasi
Faezeh Tarpoor
Azadeh Shadab
Azam Saboori
Nazanin-Zahra Shafiei Jandaghi
Vahid Salimi
Talat Mokhtari-Azad
author_facet Alireza Esmaeiloghli Amiryli
Simin Abbasi
Faezeh Tarpoor
Azadeh Shadab
Azam Saboori
Nazanin-Zahra Shafiei Jandaghi
Vahid Salimi
Talat Mokhtari-Azad
author_sort Alireza Esmaeiloghli Amiryli
collection DOAJ
description Abstract Background Measles, an ongoing public health concern, demands continuous molecular surveillance and virus characterization for elimination. Despite Iran achieving measles elimination status in 2019 through robust molecular testing and vaccination, the COVID-19 pandemic disrupted global vaccination efforts, leading to increased measles-related morbidity and mortality. This study aims to overview measles virus serological and molecular traits in Iran from 1st January 2021 to 30th April 2023. Methods Following World Health Organization and Center for Diseases and Control protocols, serological tests were performed on suspected cases and the nucleoprotein (N) gene of confirmed cases were subsequently amplified using molecular methods and were sequenced afterwards for measles genotyping. Phylogenetic analysis was performed with the obtained sequences. Results Analyzing 17,343 suspected cases from 1st January 2021 to 30th April 2023, 936, 177, and 164 samples were positive using ELISA, quantitative Reverse transcription PCR, and Reverse transcription PCR, respectively. The B3 genotype predominated, notably in Iran’s South East (41%), Central (28%), and South (13%) regions. Provinces bordering countries with measles outbreaks exhibited higher risk of virus importation. Genetic comparisons with measles sequences submitted to NCBI and MeaNS databases revealed direct importation and contact transmission. Conclusion Regular surveillance and genetic analysis are critical for understanding measles transmission and reacting to outbreaks. The COVID-19 pandemic yielded mixed effects on measles cases, enhancing hygiene measures while causing underreporting and vaccination gaps. Vigilance against measles resurgence is crucial, requiring cross-border transmission studies, improving cross-border surveillance and adaptable vaccination strategies.
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spelling doaj-art-e7e1b5f0a47b44a6bfdfb802399dd8d92025-08-20T03:52:20ZengBMCBMC Infectious Diseases1471-23342025-01-012511910.1186/s12879-025-10473-wGenetic characterization of measles virus circulating in Iran, 2021–2023Alireza Esmaeiloghli Amiryli0Simin Abbasi1Faezeh Tarpoor2Azadeh Shadab3Azam Saboori4Nazanin-Zahra Shafiei Jandaghi5Vahid Salimi6Talat Mokhtari-Azad7Department of Virology, School of Public Health, National Measles Laboratory (NML), Tehran University of Medical SciencesDepartment of Virology, School of Public Health, National Measles Laboratory (NML), Tehran University of Medical SciencesDepartment of Virology, School of Public Health, National Measles Laboratory (NML), Tehran University of Medical SciencesDepartment of Virology, School of Public Health, National Measles Laboratory (NML), Tehran University of Medical SciencesCentre for Communicable Diseases Control, Ministry of Health and Medical EducationDepartment of Virology, School of Public Health, National Measles Laboratory (NML), Tehran University of Medical SciencesDepartment of Virology, School of Public Health, National Measles Laboratory (NML), Tehran University of Medical SciencesDepartment of Virology, School of Public Health, National Measles Laboratory (NML), Tehran University of Medical SciencesAbstract Background Measles, an ongoing public health concern, demands continuous molecular surveillance and virus characterization for elimination. Despite Iran achieving measles elimination status in 2019 through robust molecular testing and vaccination, the COVID-19 pandemic disrupted global vaccination efforts, leading to increased measles-related morbidity and mortality. This study aims to overview measles virus serological and molecular traits in Iran from 1st January 2021 to 30th April 2023. Methods Following World Health Organization and Center for Diseases and Control protocols, serological tests were performed on suspected cases and the nucleoprotein (N) gene of confirmed cases were subsequently amplified using molecular methods and were sequenced afterwards for measles genotyping. Phylogenetic analysis was performed with the obtained sequences. Results Analyzing 17,343 suspected cases from 1st January 2021 to 30th April 2023, 936, 177, and 164 samples were positive using ELISA, quantitative Reverse transcription PCR, and Reverse transcription PCR, respectively. The B3 genotype predominated, notably in Iran’s South East (41%), Central (28%), and South (13%) regions. Provinces bordering countries with measles outbreaks exhibited higher risk of virus importation. Genetic comparisons with measles sequences submitted to NCBI and MeaNS databases revealed direct importation and contact transmission. Conclusion Regular surveillance and genetic analysis are critical for understanding measles transmission and reacting to outbreaks. The COVID-19 pandemic yielded mixed effects on measles cases, enhancing hygiene measures while causing underreporting and vaccination gaps. Vigilance against measles resurgence is crucial, requiring cross-border transmission studies, improving cross-border surveillance and adaptable vaccination strategies.https://doi.org/10.1186/s12879-025-10473-wMeaslesMolecular surveillanceGenotypic characterizationCOVID-19B3 genotypeIran
spellingShingle Alireza Esmaeiloghli Amiryli
Simin Abbasi
Faezeh Tarpoor
Azadeh Shadab
Azam Saboori
Nazanin-Zahra Shafiei Jandaghi
Vahid Salimi
Talat Mokhtari-Azad
Genetic characterization of measles virus circulating in Iran, 2021–2023
BMC Infectious Diseases
Measles
Molecular surveillance
Genotypic characterization
COVID-19
B3 genotype
Iran
title Genetic characterization of measles virus circulating in Iran, 2021–2023
title_full Genetic characterization of measles virus circulating in Iran, 2021–2023
title_fullStr Genetic characterization of measles virus circulating in Iran, 2021–2023
title_full_unstemmed Genetic characterization of measles virus circulating in Iran, 2021–2023
title_short Genetic characterization of measles virus circulating in Iran, 2021–2023
title_sort genetic characterization of measles virus circulating in iran 2021 2023
topic Measles
Molecular surveillance
Genotypic characterization
COVID-19
B3 genotype
Iran
url https://doi.org/10.1186/s12879-025-10473-w
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