Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis

ABSTRACT Human milk oligosaccharides (HMOs) are uniquely rich in the type 1 building block disaccharide lacto-N-biose I (LNB; Galβ1,3GlcNAc), as compared to other mammals. Most HMOs are fucosylated, for example, α1,2 and α1,4 fucosylations on LNB blocks, resulting in H type 1 (H1) and Lewis a (Lea)...

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Main Authors: Morten Ejby Hansen, Mikiyasu Sakanaka, Mathias Jensen, Hiroka Sakanaka, Michael Jakob Pichler, Shingo Maeda, Julie Franck Høvring, Aruto Nakajima, Sonja Kunstmann, Tine Sofie Nielsen, Günther Herbert Johannes Peters, Dirk Jan Slotboom, Jens Preben Morth, Takane Katayama, Maher Abou Hachem
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Language:English
Published: American Society for Microbiology 2025-08-01
Series:mBio
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Online Access:https://journals.asm.org/doi/10.1128/mbio.00368-25
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author Morten Ejby Hansen
Mikiyasu Sakanaka
Mathias Jensen
Hiroka Sakanaka
Michael Jakob Pichler
Shingo Maeda
Julie Franck Høvring
Aruto Nakajima
Sonja Kunstmann
Tine Sofie Nielsen
Günther Herbert Johannes Peters
Dirk Jan Slotboom
Jens Preben Morth
Takane Katayama
Maher Abou Hachem
author_facet Morten Ejby Hansen
Mikiyasu Sakanaka
Mathias Jensen
Hiroka Sakanaka
Michael Jakob Pichler
Shingo Maeda
Julie Franck Høvring
Aruto Nakajima
Sonja Kunstmann
Tine Sofie Nielsen
Günther Herbert Johannes Peters
Dirk Jan Slotboom
Jens Preben Morth
Takane Katayama
Maher Abou Hachem
author_sort Morten Ejby Hansen
collection DOAJ
description ABSTRACT Human milk oligosaccharides (HMOs) are uniquely rich in the type 1 building block disaccharide lacto-N-biose I (LNB; Galβ1,3GlcNAc), as compared to other mammals. Most HMOs are fucosylated, for example, α1,2 and α1,4 fucosylations on LNB blocks, resulting in H type 1 (H1) and Lewis a (Lea) epitopes, respectively. The dominance of Bifidobacterium in breastfed infant guts hinges on the efficient uptake of HMOs by specific ATP-binding cassette (ABC) importers. However, molecular insight into uptake of fucosylated LNB blocks is lacking. Here, we analyzed the uptake of LNB and its fucosylated H1 and Lea trisaccharides, as well as the mucin-derived disaccharide galacto-N-biose (GNB; Galβ1,3GalNAc) by an ABC importer from the HMO-utilization specialist Bifidobacterium longum subsp. infantis. Structural analyses and molecular dynamics simulations explained how fucosylated and non-fucosylated LNB forms are recognized with similar affinities by the binding protein of this importer. Strikingly, we showed that two ABC importers confer to the uptake of LNB, while the Lea trisaccharide is efficiently internalized by a single importer in B. infantis. Phylogenetic and structural analyses of bifidobacterial ABC-associated binding proteins showed that the Lea clade harbors homologs possessing internal cavities, which allows for the accommodation of branched oligosaccharides. Our work provides unique insight into the evolution and molecular basis of capture and uptake of key HMO and host-derived saccharide blocks, highlighting these compounds as hitherto unexplored candidates for fortification of infant formula.IMPORTANCEThe assembly of the gut microbiota in early life is critical to the health trajectory of human hosts. Breast feeding selects for a Bifidobacterium-rich community, adapted to efficiently utilize human milk oligosaccharides (HMOs) from mother's milk. Industrial scale production of HMOs for infant formula fortification has mainly considered fucosyllactoses, whereas fucosylated type 1 HMO blocks have hitherto not been explored. Our work sheds light on the uptake facet, central to the utilization of fucosylated HMOs with type 1 LNB building blocks. These type I blocks are efficiently internalized and assimilated by B. infantis, which has been recently shown to secrete immune-modulatory aromatic-lactate metabolites that mediate immune-priming of hosts in early life. This study contributes to our understanding of the utilization of HMOs and highlights fucosylated LNB blocks, as hitherto unexplored prebiotic candidates that support the growth of B. infantis and other beneficial gut bacteria in early life.
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spelling doaj-art-e2b7a6ba41f541d7912aa7922441adb52025-08-20T04:00:50ZengAmerican Society for MicrobiologymBio2150-75112025-08-0116810.1128/mbio.00368-25Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantisMorten Ejby Hansen0Mikiyasu Sakanaka1Mathias Jensen2Hiroka Sakanaka3Michael Jakob Pichler4Shingo Maeda5Julie Franck Høvring6Aruto Nakajima7Sonja Kunstmann8Tine Sofie Nielsen9Günther Herbert Johannes Peters10Dirk Jan Slotboom11Jens Preben Morth12Takane Katayama13Maher Abou Hachem14Department of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkFaculty of Bioresources and Environmental Sciences, Ishikawa Prefectural University, Nonoichi, Ishikawa Prefecture, JapanDepartment of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkDepartment of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkDepartment of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkFaculty of Bioresources and Environmental Sciences, Ishikawa Prefectural University, Nonoichi, Ishikawa Prefecture, JapanDepartment of Chemistry, Technical University of Denmark, Lyngby, DenmarkGraduate School of Biostudies, Kyoto University, Kyoto, JapanDepartment of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkDepartment of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkDepartment of Chemistry, Technical University of Denmark, Lyngby, DenmarkMembrane Enzymology, Institute for Biomolecular Sciences & Biotechnology, Rijksuniversiteit Groningen, Groningen, the NetherlandsDepartment of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkGraduate School of Biostudies, Kyoto University, Kyoto, JapanDepartment of Biotechnology and Bioengineering, Technical University of Denmark, Lyngby, DenmarkABSTRACT Human milk oligosaccharides (HMOs) are uniquely rich in the type 1 building block disaccharide lacto-N-biose I (LNB; Galβ1,3GlcNAc), as compared to other mammals. Most HMOs are fucosylated, for example, α1,2 and α1,4 fucosylations on LNB blocks, resulting in H type 1 (H1) and Lewis a (Lea) epitopes, respectively. The dominance of Bifidobacterium in breastfed infant guts hinges on the efficient uptake of HMOs by specific ATP-binding cassette (ABC) importers. However, molecular insight into uptake of fucosylated LNB blocks is lacking. Here, we analyzed the uptake of LNB and its fucosylated H1 and Lea trisaccharides, as well as the mucin-derived disaccharide galacto-N-biose (GNB; Galβ1,3GalNAc) by an ABC importer from the HMO-utilization specialist Bifidobacterium longum subsp. infantis. Structural analyses and molecular dynamics simulations explained how fucosylated and non-fucosylated LNB forms are recognized with similar affinities by the binding protein of this importer. Strikingly, we showed that two ABC importers confer to the uptake of LNB, while the Lea trisaccharide is efficiently internalized by a single importer in B. infantis. Phylogenetic and structural analyses of bifidobacterial ABC-associated binding proteins showed that the Lea clade harbors homologs possessing internal cavities, which allows for the accommodation of branched oligosaccharides. Our work provides unique insight into the evolution and molecular basis of capture and uptake of key HMO and host-derived saccharide blocks, highlighting these compounds as hitherto unexplored candidates for fortification of infant formula.IMPORTANCEThe assembly of the gut microbiota in early life is critical to the health trajectory of human hosts. Breast feeding selects for a Bifidobacterium-rich community, adapted to efficiently utilize human milk oligosaccharides (HMOs) from mother's milk. Industrial scale production of HMOs for infant formula fortification has mainly considered fucosyllactoses, whereas fucosylated type 1 HMO blocks have hitherto not been explored. Our work sheds light on the uptake facet, central to the utilization of fucosylated HMOs with type 1 LNB building blocks. These type I blocks are efficiently internalized and assimilated by B. infantis, which has been recently shown to secrete immune-modulatory aromatic-lactate metabolites that mediate immune-priming of hosts in early life. This study contributes to our understanding of the utilization of HMOs and highlights fucosylated LNB blocks, as hitherto unexplored prebiotic candidates that support the growth of B. infantis and other beneficial gut bacteria in early life.https://journals.asm.org/doi/10.1128/mbio.00368-25ABC transporterBifidobacteriumhuman gut microbiotahuman milk oligosaccharidesmother's milk
spellingShingle Morten Ejby Hansen
Mikiyasu Sakanaka
Mathias Jensen
Hiroka Sakanaka
Michael Jakob Pichler
Shingo Maeda
Julie Franck Høvring
Aruto Nakajima
Sonja Kunstmann
Tine Sofie Nielsen
Günther Herbert Johannes Peters
Dirk Jan Slotboom
Jens Preben Morth
Takane Katayama
Maher Abou Hachem
Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis
mBio
ABC transporter
Bifidobacterium
human gut microbiota
human milk oligosaccharides
mother's milk
title Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis
title_full Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis
title_fullStr Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis
title_full_unstemmed Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis
title_short Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis
title_sort uptake of fucosylated type i human milk oligosaccharide blocks by bifidobacterium longum subsp infantis
topic ABC transporter
Bifidobacterium
human gut microbiota
human milk oligosaccharides
mother's milk
url https://journals.asm.org/doi/10.1128/mbio.00368-25
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