Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)

<div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e254"> <!-- named anchor --> </a> <h5 class="section-title...

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Main Authors: Shulei Jia, Xuebin Xu, Mengqi Qu, Yuhang Pei, Siqi Sun, Yue Liu, Wanting Dong, Yongfei Hu, Baoli Zhu, George F. Gao, Yanan Wang
Format: Article
Language:English
Published: Compuscript Ltd 2025-02-01
Series:Zoonoses
Online Access:https://www.scienceopen.com/hosted-document?doi=10.15212/ZOONOSES-2024-0060
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author Shulei Jia
Xuebin Xu
Mengqi Qu
Yuhang Pei
Siqi Sun
Yue Liu
Wanting Dong
Yongfei Hu
Baoli Zhu
George F. Gao
Yanan Wang
author_facet Shulei Jia
Xuebin Xu
Mengqi Qu
Yuhang Pei
Siqi Sun
Yue Liu
Wanting Dong
Yongfei Hu
Baoli Zhu
George F. Gao
Yanan Wang
author_sort Shulei Jia
collection DOAJ
description <div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e254"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e255">Objective:</h5> <p dir="auto" id="d1447918e257">The zoonotic pathogen <i>Campylobacter</i> is a major foodborne bacterial species worldwide. The distribution and drivers of antimicrobial resistance (AMR) in global <i>Campylobacter</i> strains remain largely unknown. Therefore, a comprehensive analysis of longitudinal trends and driving factors of AMR in <i>Campylobacter</i> is necessary at a global level. </p> </div><div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e268"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e269">Methods:</h5> <p dir="auto" id="d1447918e271">We downloaded from public repositories 66,771 <i>Campylobacter</i> genomes (24,115 from <i>C. coli</i> and 42,656 from <i>C. jejuni</i>) in 53 countries/regions during 1954–2023, and performed a comprehensive analysis. </p> </div><div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e282"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e283">Results:</h5> <p dir="auto" id="d1447918e285">We categorized the <i>Campylobacter</i> isolates into 2,771 sequence types (STs), 45 of which were shared among humans, chickens, pigs, cattle, and the environment. We uncovered the spatial and temporal characteristics of resistance across antimicrobial classes on a global scale, and observed increased trends in the aminoglycoside, tetracycline, and fluoroquinolone resistance of <i>C. jejuni</i> during the past 23 years. Some of the antibiotic, climate, and socioeconomic indicators collected from the World Bank might potentially have driven the rise of AMR in various countries/regions to varying degrees. </p> </div><div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e293"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e294">Conclusions:</h5> <p dir="auto" id="d1447918e296">In summary, we present a global genetic atlas of <i>Campylobacter</i>, which provides valuable insights for understanding the transmission dynamics of AMR in this species. </p> </div>
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spelling doaj-art-e0bee0dc7ad94323b48d5e747606436b2025-08-20T03:50:16ZengCompuscript LtdZoonoses2737-74662737-74742025-02-015198910.15212/ZOONOSES-2024-0060Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)Shulei JiaXuebin XuMengqi QuYuhang PeiSiqi SunYue LiuWanting DongYongfei HuBaoli ZhuGeorge F. GaoYanan Wang<div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e254"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e255">Objective:</h5> <p dir="auto" id="d1447918e257">The zoonotic pathogen <i>Campylobacter</i> is a major foodborne bacterial species worldwide. The distribution and drivers of antimicrobial resistance (AMR) in global <i>Campylobacter</i> strains remain largely unknown. Therefore, a comprehensive analysis of longitudinal trends and driving factors of AMR in <i>Campylobacter</i> is necessary at a global level. </p> </div><div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e268"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e269">Methods:</h5> <p dir="auto" id="d1447918e271">We downloaded from public repositories 66,771 <i>Campylobacter</i> genomes (24,115 from <i>C. coli</i> and 42,656 from <i>C. jejuni</i>) in 53 countries/regions during 1954–2023, and performed a comprehensive analysis. </p> </div><div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e282"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e283">Results:</h5> <p dir="auto" id="d1447918e285">We categorized the <i>Campylobacter</i> isolates into 2,771 sequence types (STs), 45 of which were shared among humans, chickens, pigs, cattle, and the environment. We uncovered the spatial and temporal characteristics of resistance across antimicrobial classes on a global scale, and observed increased trends in the aminoglycoside, tetracycline, and fluoroquinolone resistance of <i>C. jejuni</i> during the past 23 years. Some of the antibiotic, climate, and socioeconomic indicators collected from the World Bank might potentially have driven the rise of AMR in various countries/regions to varying degrees. </p> </div><div xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" class="section"> <a class="named-anchor" id="d1447918e293"> <!-- named anchor --> </a> <h5 class="section-title" id="d1447918e294">Conclusions:</h5> <p dir="auto" id="d1447918e296">In summary, we present a global genetic atlas of <i>Campylobacter</i>, which provides valuable insights for understanding the transmission dynamics of AMR in this species. </p> </div>https://www.scienceopen.com/hosted-document?doi=10.15212/ZOONOSES-2024-0060
spellingShingle Shulei Jia
Xuebin Xu
Mengqi Qu
Yuhang Pei
Siqi Sun
Yue Liu
Wanting Dong
Yongfei Hu
Baoli Zhu
George F. Gao
Yanan Wang
Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)
Zoonoses
title Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)
title_full Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)
title_fullStr Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)
title_full_unstemmed Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)
title_short Longitudinal Trends and Drivers of Antimicrobial Resistance in <i>Campylobacter</i> Worldwide (1954-2023)
title_sort longitudinal trends and drivers of antimicrobial resistance in i campylobacter i worldwide 1954 2023
url https://www.scienceopen.com/hosted-document?doi=10.15212/ZOONOSES-2024-0060
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