Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case Series

<b>Background/Objectives</b>: The main objective of the study is to assess the clinical utility of microbial cell-free DNA (mcfDNA) in neutropenic patients diagnosed with acute myeloid leukemia (AML) undergoing chemotherapy in the outpatient setting. Neutropenia is a common complication...

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Main Authors: Maria Lampou, Elizabeth C. Trull, Hailey M. Warren, Musie S. Ghebremichael, Raja Nakka, Daniel J. Floyd, Amir T. Fathi, Andrew M. Brunner, Michael K. Mansour
Format: Article
Language:English
Published: MDPI AG 2025-07-01
Series:Diagnostics
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Online Access:https://www.mdpi.com/2075-4418/15/13/1715
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author Maria Lampou
Elizabeth C. Trull
Hailey M. Warren
Musie S. Ghebremichael
Raja Nakka
Daniel J. Floyd
Amir T. Fathi
Andrew M. Brunner
Michael K. Mansour
author_facet Maria Lampou
Elizabeth C. Trull
Hailey M. Warren
Musie S. Ghebremichael
Raja Nakka
Daniel J. Floyd
Amir T. Fathi
Andrew M. Brunner
Michael K. Mansour
author_sort Maria Lampou
collection DOAJ
description <b>Background/Objectives</b>: The main objective of the study is to assess the clinical utility of microbial cell-free DNA (mcfDNA) in neutropenic patients diagnosed with acute myeloid leukemia (AML) undergoing chemotherapy in the outpatient setting. Neutropenia is a common complication in this patient cohort and enhances the risk of fatal opportunistic bacterial and fungal infections. Accurate and timely diagnosis of these infections in outpatient asymptomatic individuals is critical. <b>Methods</b>: Fourteen patients were studied in this prospective observational case series. Traditional blood cultures (BCs) were obtained when clinically indicated and blood samples were collected for plasma mcfDNA metagenomic sequencing up to two times a week at outpatient oncology appointments. Results were compared in identifying potential infectious agents. <b>Results</b>: BCs identified pathogens in only two patients, despite several cases where infection was suspected. In contrast, mcfDNA testing detected pathogens in 11 of the 14 patients, including bacteria, such as <i>Staphylococcus aureus</i>, and invasive fungi, such as <i>Candida</i> and <i>Aspergillus</i> species, and <i>Pneumocystis jirovecii</i>. <b>Conclusions</b>: In the outpatient setting, mcfDNA surveillance offers a more reliable method for detecting pathogens. This approach identified actionable microbiologic results in immunocompromised individuals who did not meet standard clinical criteria for suspicion of infection. Further research is required to confirm the potential of mcfDNA surveillance in an outpatient setting to guide more accurate treatment decisions, reduce extensive clinical investigations, and improve neutropenic patient outcomes.
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spelling doaj-art-e02dc3968b7f4616aeea6d9870e9e9ee2025-08-20T03:50:17ZengMDPI AGDiagnostics2075-44182025-07-011513171510.3390/diagnostics15131715Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case SeriesMaria Lampou0Elizabeth C. Trull1Hailey M. Warren2Musie S. Ghebremichael3Raja Nakka4Daniel J. Floyd5Amir T. Fathi6Andrew M. Brunner7Michael K. Mansour8Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114, USADivision of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114, USADivision of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114, USADepartment of Medicine, Harvard Medical School, Boston, MA 02115, USARagon Institute of Mass General Brigham, Massachusetts Institute of Technology and Harvard, Cambridge, MA 02139, USADivision of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114, USADepartment of Medicine, Harvard Medical School, Boston, MA 02115, USADepartment of Medicine, Harvard Medical School, Boston, MA 02115, USADivision of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114, USA<b>Background/Objectives</b>: The main objective of the study is to assess the clinical utility of microbial cell-free DNA (mcfDNA) in neutropenic patients diagnosed with acute myeloid leukemia (AML) undergoing chemotherapy in the outpatient setting. Neutropenia is a common complication in this patient cohort and enhances the risk of fatal opportunistic bacterial and fungal infections. Accurate and timely diagnosis of these infections in outpatient asymptomatic individuals is critical. <b>Methods</b>: Fourteen patients were studied in this prospective observational case series. Traditional blood cultures (BCs) were obtained when clinically indicated and blood samples were collected for plasma mcfDNA metagenomic sequencing up to two times a week at outpatient oncology appointments. Results were compared in identifying potential infectious agents. <b>Results</b>: BCs identified pathogens in only two patients, despite several cases where infection was suspected. In contrast, mcfDNA testing detected pathogens in 11 of the 14 patients, including bacteria, such as <i>Staphylococcus aureus</i>, and invasive fungi, such as <i>Candida</i> and <i>Aspergillus</i> species, and <i>Pneumocystis jirovecii</i>. <b>Conclusions</b>: In the outpatient setting, mcfDNA surveillance offers a more reliable method for detecting pathogens. This approach identified actionable microbiologic results in immunocompromised individuals who did not meet standard clinical criteria for suspicion of infection. Further research is required to confirm the potential of mcfDNA surveillance in an outpatient setting to guide more accurate treatment decisions, reduce extensive clinical investigations, and improve neutropenic patient outcomes.https://www.mdpi.com/2075-4418/15/13/1715microbial cell-free DNAinfectionshematologic malignanciesacute myeloid leukemianeutropeniaimmunocompromised
spellingShingle Maria Lampou
Elizabeth C. Trull
Hailey M. Warren
Musie S. Ghebremichael
Raja Nakka
Daniel J. Floyd
Amir T. Fathi
Andrew M. Brunner
Michael K. Mansour
Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case Series
Diagnostics
microbial cell-free DNA
infections
hematologic malignancies
acute myeloid leukemia
neutropenia
immunocompromised
title Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case Series
title_full Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case Series
title_fullStr Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case Series
title_full_unstemmed Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case Series
title_short Clinical Utility of Plasma Microbial Cell-Free DNA Surveillance in Neutropenic Patients with Acute Myeloid Leukemia Undergoing Outpatient Chemotherapy: A Case Series
title_sort clinical utility of plasma microbial cell free dna surveillance in neutropenic patients with acute myeloid leukemia undergoing outpatient chemotherapy a case series
topic microbial cell-free DNA
infections
hematologic malignancies
acute myeloid leukemia
neutropenia
immunocompromised
url https://www.mdpi.com/2075-4418/15/13/1715
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