Spatially mapping the tumour immune microenvironments of non-small cell lung cancer

Abstract Lung cancer is the leading cause of cancer-related deaths. An enhanced understanding of the immune microenvironments within these tumours may foster more precise and efficient treatment, particularly for immune-targeted therapies. The spatial architectural differences between lung adenocarc...

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Main Authors: Lysanne Desharnais, Mark Sorin, Morteza Rezanejad, Bridget Liu, Elham Karimi, Aline Atallah, Anikka M. Swaby, Miranda W. Yu, Samuel Doré, Saskia Hartner, Benoit Fiset, Yuhong Wei, Baharak Kadang, Roni Rayes, Philippe Joubert, Sophie Camilleri-Broët, Pierre-Olivier Fiset, Daniela F. Quail, Jonathan D. Spicer, Logan A. Walsh
Format: Article
Language:English
Published: Nature Portfolio 2025-02-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-56546-x
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author Lysanne Desharnais
Mark Sorin
Morteza Rezanejad
Bridget Liu
Elham Karimi
Aline Atallah
Anikka M. Swaby
Miranda W. Yu
Samuel Doré
Saskia Hartner
Benoit Fiset
Yuhong Wei
Baharak Kadang
Roni Rayes
Philippe Joubert
Sophie Camilleri-Broët
Pierre-Olivier Fiset
Daniela F. Quail
Jonathan D. Spicer
Logan A. Walsh
author_facet Lysanne Desharnais
Mark Sorin
Morteza Rezanejad
Bridget Liu
Elham Karimi
Aline Atallah
Anikka M. Swaby
Miranda W. Yu
Samuel Doré
Saskia Hartner
Benoit Fiset
Yuhong Wei
Baharak Kadang
Roni Rayes
Philippe Joubert
Sophie Camilleri-Broët
Pierre-Olivier Fiset
Daniela F. Quail
Jonathan D. Spicer
Logan A. Walsh
author_sort Lysanne Desharnais
collection DOAJ
description Abstract Lung cancer is the leading cause of cancer-related deaths. An enhanced understanding of the immune microenvironments within these tumours may foster more precise and efficient treatment, particularly for immune-targeted therapies. The spatial architectural differences between lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC) are relatively unexplored. Here, we applied imaging mass cytometry to a balanced cohort of LUAD and LUSC patients, matched for clinical factors such as age, sex, and smoking history, to analyze 204 histopathology images of tumours from 102 individuals with non-small cell lung cancer (NSCLC). By analyzing interactions and broader cellular networks, we interrogate the tumour microenvironment to understand how immune cells are spatially organized in clinically matched adenocarcinoma and squamous cell carcinoma subsets. This spatial analysis revealed distinct patterns of immune cell aggregation, particularly among macrophage populations, that correlated with patient prognosis differentially in adenocarcinoma and squamous cell carcinoma, suggesting potential new strategies for therapeutic intervention. Our findings underscore the importance of analyzing NSCLC histological subtypes separately when investigating the spatial immune landscape, as microenvironmental characteristics and cellular interactions differed by subtype. Recognizing these distinctions is essential for designing precision therapies tailored to each subtype’s unique immune architecture, ultimately enhancing patient outcomes.
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spelling doaj-art-df57836258fb4823a052372cc6692e002025-02-09T12:44:16ZengNature PortfolioNature Communications2041-17232025-02-0116111210.1038/s41467-025-56546-xSpatially mapping the tumour immune microenvironments of non-small cell lung cancerLysanne Desharnais0Mark Sorin1Morteza Rezanejad2Bridget Liu3Elham Karimi4Aline Atallah5Anikka M. Swaby6Miranda W. Yu7Samuel Doré8Saskia Hartner9Benoit Fiset10Yuhong Wei11Baharak Kadang12Roni Rayes13Philippe Joubert14Sophie Camilleri-Broët15Pierre-Olivier Fiset16Daniela F. Quail17Jonathan D. Spicer18Logan A. Walsh19Rosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityDepartment of Pathology, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityDépartement de biologie moléculaire, biochimie médicale et de pathologie, Laval UniversityDepartment of Pathology, McGill UniversityDepartment of Pathology, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityRosalind and Morris Goodman Cancer Institute, McGill UniversityAbstract Lung cancer is the leading cause of cancer-related deaths. An enhanced understanding of the immune microenvironments within these tumours may foster more precise and efficient treatment, particularly for immune-targeted therapies. The spatial architectural differences between lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC) are relatively unexplored. Here, we applied imaging mass cytometry to a balanced cohort of LUAD and LUSC patients, matched for clinical factors such as age, sex, and smoking history, to analyze 204 histopathology images of tumours from 102 individuals with non-small cell lung cancer (NSCLC). By analyzing interactions and broader cellular networks, we interrogate the tumour microenvironment to understand how immune cells are spatially organized in clinically matched adenocarcinoma and squamous cell carcinoma subsets. This spatial analysis revealed distinct patterns of immune cell aggregation, particularly among macrophage populations, that correlated with patient prognosis differentially in adenocarcinoma and squamous cell carcinoma, suggesting potential new strategies for therapeutic intervention. Our findings underscore the importance of analyzing NSCLC histological subtypes separately when investigating the spatial immune landscape, as microenvironmental characteristics and cellular interactions differed by subtype. Recognizing these distinctions is essential for designing precision therapies tailored to each subtype’s unique immune architecture, ultimately enhancing patient outcomes.https://doi.org/10.1038/s41467-025-56546-x
spellingShingle Lysanne Desharnais
Mark Sorin
Morteza Rezanejad
Bridget Liu
Elham Karimi
Aline Atallah
Anikka M. Swaby
Miranda W. Yu
Samuel Doré
Saskia Hartner
Benoit Fiset
Yuhong Wei
Baharak Kadang
Roni Rayes
Philippe Joubert
Sophie Camilleri-Broët
Pierre-Olivier Fiset
Daniela F. Quail
Jonathan D. Spicer
Logan A. Walsh
Spatially mapping the tumour immune microenvironments of non-small cell lung cancer
Nature Communications
title Spatially mapping the tumour immune microenvironments of non-small cell lung cancer
title_full Spatially mapping the tumour immune microenvironments of non-small cell lung cancer
title_fullStr Spatially mapping the tumour immune microenvironments of non-small cell lung cancer
title_full_unstemmed Spatially mapping the tumour immune microenvironments of non-small cell lung cancer
title_short Spatially mapping the tumour immune microenvironments of non-small cell lung cancer
title_sort spatially mapping the tumour immune microenvironments of non small cell lung cancer
url https://doi.org/10.1038/s41467-025-56546-x
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