The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae)
This study presents the complete chloroplast genome of Cinnamomum daphnoides (154,121 bp, GC 39.2%), a newly recorded species in China, revealing a typical quadripartite structure: a large single-copy region (93,688 bp, GC 37.9%), a small single-copy region (18,929 bp, GC 33.9%), and two inverted re...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2025-05-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2025.2492098 |
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| author | Yang Chen Xiupeng Li Minfen Yu Bin Wei Yan Huang Jianhong Zhang |
| author_facet | Yang Chen Xiupeng Li Minfen Yu Bin Wei Yan Huang Jianhong Zhang |
| author_sort | Yang Chen |
| collection | DOAJ |
| description | This study presents the complete chloroplast genome of Cinnamomum daphnoides (154,121 bp, GC 39.2%), a newly recorded species in China, revealing a typical quadripartite structure: a large single-copy region (93,688 bp, GC 37.9%), a small single-copy region (18,929 bp, GC 33.9%), and two inverted repeats (20,752 bp each, GC 44.3%). The genome harbors 126 genes (82 protein-coding, 36 tRNA, 8 rRNA). Phylogenetic analysis groups C. daphnoides with C. tamala, differing from prior studies. These findings clarify its systematic position within Cinnamomum and support its potential for coastal greening applications. |
| format | Article |
| id | doaj-art-db55bb14a57242c6a00eeecdb2642c0b |
| institution | Kabale University |
| issn | 2380-2359 |
| language | English |
| publishDate | 2025-05-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-db55bb14a57242c6a00eeecdb2642c0b2025-08-20T03:53:42ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592025-05-0110538739110.1080/23802359.2025.2492098The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae)Yang Chen0Xiupeng Li1Minfen Yu2Bin Wei3Yan Huang4Jianhong Zhang5Institute of Forestry, Ningbo Academy of Agricultural Science, Ningbo, ChinaNingbo Forest Farm, Ningbo Forestry Technical Service Center, Ningbo, ChinaNingbo Forest Farm, Ningbo Forestry Technical Service Center, Ningbo, ChinaInstitute of Forestry, Ningbo Academy of Agricultural Science, Ningbo, ChinaWuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, ChinaInstitute of Forestry, Ningbo Academy of Agricultural Science, Ningbo, ChinaThis study presents the complete chloroplast genome of Cinnamomum daphnoides (154,121 bp, GC 39.2%), a newly recorded species in China, revealing a typical quadripartite structure: a large single-copy region (93,688 bp, GC 37.9%), a small single-copy region (18,929 bp, GC 33.9%), and two inverted repeats (20,752 bp each, GC 44.3%). The genome harbors 126 genes (82 protein-coding, 36 tRNA, 8 rRNA). Phylogenetic analysis groups C. daphnoides with C. tamala, differing from prior studies. These findings clarify its systematic position within Cinnamomum and support its potential for coastal greening applications.https://www.tandfonline.com/doi/10.1080/23802359.2025.2492098Cinnamomum daphnoideschloroplast genomeLauraceaephylogeny |
| spellingShingle | Yang Chen Xiupeng Li Minfen Yu Bin Wei Yan Huang Jianhong Zhang The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae) Mitochondrial DNA. Part B. Resources Cinnamomum daphnoides chloroplast genome Lauraceae phylogeny |
| title | The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae) |
| title_full | The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae) |
| title_fullStr | The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae) |
| title_full_unstemmed | The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae) |
| title_short | The complete chloroplast genome and phylogenetic analysis of Cinnamomum daphnoides (Laurales: Lauraceae) |
| title_sort | complete chloroplast genome and phylogenetic analysis of cinnamomum daphnoides laurales lauraceae |
| topic | Cinnamomum daphnoides chloroplast genome Lauraceae phylogeny |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2025.2492098 |
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