Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway

ABSTRACT During mammalian colonization and infection, microorganisms must be able to rapidly sense and adapt to changing environmental conditions including alterations in extracellular pH. The fungus-specific Rim/Pal signaling pathway is one process that supports microbial adaptation to alkaline pH....

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Main Authors: Kaila M. Pianalto, Calla L. Telzrow, Hannah Brown Harding, Jacob T. Brooks, Joshua A. Granek, Eduardo Gushiken-Ibañez, Salomé LeibundGut-Landmann, Joseph Heitman, Giuseppe Ianiri, J. Andrew Alspaugh
Format: Article
Language:English
Published: American Society for Microbiology 2024-10-01
Series:mBio
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Online Access:https://journals.asm.org/doi/10.1128/mbio.02060-24
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author Kaila M. Pianalto
Calla L. Telzrow
Hannah Brown Harding
Jacob T. Brooks
Joshua A. Granek
Eduardo Gushiken-Ibañez
Salomé LeibundGut-Landmann
Joseph Heitman
Giuseppe Ianiri
J. Andrew Alspaugh
author_facet Kaila M. Pianalto
Calla L. Telzrow
Hannah Brown Harding
Jacob T. Brooks
Joshua A. Granek
Eduardo Gushiken-Ibañez
Salomé LeibundGut-Landmann
Joseph Heitman
Giuseppe Ianiri
J. Andrew Alspaugh
author_sort Kaila M. Pianalto
collection DOAJ
description ABSTRACT During mammalian colonization and infection, microorganisms must be able to rapidly sense and adapt to changing environmental conditions including alterations in extracellular pH. The fungus-specific Rim/Pal signaling pathway is one process that supports microbial adaptation to alkaline pH. This cascading series of interacting proteins terminates in the proteolytic activation of the highly conserved Rim101/PacC protein, a transcription factor that mediates microbial responses that favor survival in neutral/alkaline pH growth conditions, including many mammalian tissues. We identified the putative Rim pathway proteins Rim101 and Rra1 in the human skin colonizing fungus Malassezia sympodialis. Gene deletion by transconjugation and homologous recombination revealed that Rim101 and Rra1 are required for M. sympodialis growth at higher pH. In addition, comparative transcriptional analysis of the mutant strains compared to wild-type suggested mechanisms for fungal adaptation to alkaline conditions. These pH-sensing signaling proteins are required for optimal growth in a murine model of atopic dermatitis, a pathological condition associated with increased skin pH. Together, these data elucidate both conserved and phylum-specific features of microbial adaptation to extracellular stresses.IMPORTANCEThe ability to adapt to host pH has been previously associated with microbial virulence in several pathogenic fungal species. Here we demonstrate that a fungal-specific alkaline response pathway is conserved in the human skin commensal fungus Malassezia sympodialis (Ms). This pathway is characterized by the pH-dependent activation of the Rim101/PacC transcription factor that controls cell surface adaptations to changing environmental conditions. By disrupting genes encoding two predicted components of this pathway, we demonstrated that the Rim/Pal pathway is conserved in this fungal species as a facilitator of alkaline pH growth. Moreover, targeted gene mutation and comparative transcriptional analysis support the role of the Ms Rra1 protein as a cell surface pH sensor conserved within the basidiomycete fungi, a group including plant and human pathogens. Using an animal model of atopic dermatitis, we demonstrate the importance of Ms Rim/Pal signaling in this common inflammatory condition characterized by increased skin pH.
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spelling doaj-art-dada565781b7409a9bc8099b6a4d1b792025-08-20T02:17:06ZengAmerican Society for MicrobiologymBio2150-75112024-10-01151010.1128/mbio.02060-24Malassezia responds to environmental pH signals through the conserved Rim/Pal pathwayKaila M. Pianalto0Calla L. Telzrow1Hannah Brown Harding2Jacob T. Brooks3Joshua A. Granek4Eduardo Gushiken-Ibañez5Salomé LeibundGut-Landmann6Joseph Heitman7Giuseppe Ianiri8J. Andrew Alspaugh9Department of Medicine, Duke University School of Medicine, Durham, North Carolina, USADepartment of Medicine, Duke University School of Medicine, Durham, North Carolina, USADepartment of Medicine, Duke University School of Medicine, Durham, North Carolina, USADepartment of Physics and Astronomy, University of North Carolina, Chapel Hill, North Carolina, USADepartment of Molecular Genetics and Microbiology, Duke University School of Medicine, Durham, North Carolina, USASection of Immunology at Vetsuisse Faculty, University of Zurich, Zurich, SwitzerlandSection of Immunology at Vetsuisse Faculty, University of Zurich, Zurich, SwitzerlandDepartment of Medicine, Duke University School of Medicine, Durham, North Carolina, USADepartment of Agricultural, Environmental and Food Sciences, Università degli Studi del Molise, Campobasso, ItalyDepartment of Medicine, Duke University School of Medicine, Durham, North Carolina, USAABSTRACT During mammalian colonization and infection, microorganisms must be able to rapidly sense and adapt to changing environmental conditions including alterations in extracellular pH. The fungus-specific Rim/Pal signaling pathway is one process that supports microbial adaptation to alkaline pH. This cascading series of interacting proteins terminates in the proteolytic activation of the highly conserved Rim101/PacC protein, a transcription factor that mediates microbial responses that favor survival in neutral/alkaline pH growth conditions, including many mammalian tissues. We identified the putative Rim pathway proteins Rim101 and Rra1 in the human skin colonizing fungus Malassezia sympodialis. Gene deletion by transconjugation and homologous recombination revealed that Rim101 and Rra1 are required for M. sympodialis growth at higher pH. In addition, comparative transcriptional analysis of the mutant strains compared to wild-type suggested mechanisms for fungal adaptation to alkaline conditions. These pH-sensing signaling proteins are required for optimal growth in a murine model of atopic dermatitis, a pathological condition associated with increased skin pH. Together, these data elucidate both conserved and phylum-specific features of microbial adaptation to extracellular stresses.IMPORTANCEThe ability to adapt to host pH has been previously associated with microbial virulence in several pathogenic fungal species. Here we demonstrate that a fungal-specific alkaline response pathway is conserved in the human skin commensal fungus Malassezia sympodialis (Ms). This pathway is characterized by the pH-dependent activation of the Rim101/PacC transcription factor that controls cell surface adaptations to changing environmental conditions. By disrupting genes encoding two predicted components of this pathway, we demonstrated that the Rim/Pal pathway is conserved in this fungal species as a facilitator of alkaline pH growth. Moreover, targeted gene mutation and comparative transcriptional analysis support the role of the Ms Rra1 protein as a cell surface pH sensor conserved within the basidiomycete fungi, a group including plant and human pathogens. Using an animal model of atopic dermatitis, we demonstrate the importance of Ms Rim/Pal signaling in this common inflammatory condition characterized by increased skin pH.https://journals.asm.org/doi/10.1128/mbio.02060-24Malassezia sympodialismycosisalkaline responsefungal pathogenesisfungal infection
spellingShingle Kaila M. Pianalto
Calla L. Telzrow
Hannah Brown Harding
Jacob T. Brooks
Joshua A. Granek
Eduardo Gushiken-Ibañez
Salomé LeibundGut-Landmann
Joseph Heitman
Giuseppe Ianiri
J. Andrew Alspaugh
Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway
mBio
Malassezia sympodialis
mycosis
alkaline response
fungal pathogenesis
fungal infection
title Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway
title_full Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway
title_fullStr Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway
title_full_unstemmed Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway
title_short Malassezia responds to environmental pH signals through the conserved Rim/Pal pathway
title_sort malassezia responds to environmental ph signals through the conserved rim pal pathway
topic Malassezia sympodialis
mycosis
alkaline response
fungal pathogenesis
fungal infection
url https://journals.asm.org/doi/10.1128/mbio.02060-24
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