Engineering Escherichia coli to Utilize Erythritol as Sole Carbon Source

Abstract Erythritol, one of the natural sugar alcohols, is widely used as a sugar substitute sweetener in food industries. Humans themselves are not able to catabolize erythritol and their gut microbes lack related catabolic pathways either to metabolize erythritol. Here, Escherichia coli (E. coli)...

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Main Authors: Fang Ba, Xiangyang Ji, Shuhui Huang, Yufei Zhang, Wan‐Qiu Liu, Yifan Liu, Shengjie Ling, Jian Li
Format: Article
Language:English
Published: Wiley 2023-05-01
Series:Advanced Science
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Online Access:https://doi.org/10.1002/advs.202207008
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author Fang Ba
Xiangyang Ji
Shuhui Huang
Yufei Zhang
Wan‐Qiu Liu
Yifan Liu
Shengjie Ling
Jian Li
author_facet Fang Ba
Xiangyang Ji
Shuhui Huang
Yufei Zhang
Wan‐Qiu Liu
Yifan Liu
Shengjie Ling
Jian Li
author_sort Fang Ba
collection DOAJ
description Abstract Erythritol, one of the natural sugar alcohols, is widely used as a sugar substitute sweetener in food industries. Humans themselves are not able to catabolize erythritol and their gut microbes lack related catabolic pathways either to metabolize erythritol. Here, Escherichia coli (E. coli) is engineered to utilize erythritol as sole carbon source aiming for defined applications. First, the erythritol metabolic gene cluster is isolated and the erythritol‐binding transcriptional repressor and its DNA‐binding site are experimentally characterized. Transcriptome analysis suggests that carbohydrate metabolism‐related genes in the engineered E. coli are overall upregulated. In particular, the enzymes of transaldolase (talA and talB) and transketolase (tktA and tktB) are notably overexpressed (e.g., the expression of tktB is improved by nearly sixfold). By overexpression of the four genes, cell growth can be increased as high as three times compared to the cell cultivation without overexpression. Finally, engineered E. coli strains can be used as a living detector to distinguish erythritol‐containing soda soft drinks and can grow in the simulated intestinal fluid supplemented with erythritol. This work is expected to inspire the engineering of more hosts to respond and utilize erythritol for broad applications in metabolic engineering, synthetic biology, and biomedical engineering.
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spelling doaj-art-d3a66f98a26f4d75a8957dddf1d3193f2025-08-20T03:04:57ZengWileyAdvanced Science2198-38442023-05-011014n/an/a10.1002/advs.202207008Engineering Escherichia coli to Utilize Erythritol as Sole Carbon SourceFang Ba0Xiangyang Ji1Shuhui Huang2Yufei Zhang3Wan‐Qiu Liu4Yifan Liu5Shengjie Ling6Jian Li7School of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaSchool of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaSchool of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaSchool of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaSchool of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaSchool of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaSchool of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaSchool of Physical Science and Technology ShanghaiTech University Shanghai 201210 P. R. ChinaAbstract Erythritol, one of the natural sugar alcohols, is widely used as a sugar substitute sweetener in food industries. Humans themselves are not able to catabolize erythritol and their gut microbes lack related catabolic pathways either to metabolize erythritol. Here, Escherichia coli (E. coli) is engineered to utilize erythritol as sole carbon source aiming for defined applications. First, the erythritol metabolic gene cluster is isolated and the erythritol‐binding transcriptional repressor and its DNA‐binding site are experimentally characterized. Transcriptome analysis suggests that carbohydrate metabolism‐related genes in the engineered E. coli are overall upregulated. In particular, the enzymes of transaldolase (talA and talB) and transketolase (tktA and tktB) are notably overexpressed (e.g., the expression of tktB is improved by nearly sixfold). By overexpression of the four genes, cell growth can be increased as high as three times compared to the cell cultivation without overexpression. Finally, engineered E. coli strains can be used as a living detector to distinguish erythritol‐containing soda soft drinks and can grow in the simulated intestinal fluid supplemented with erythritol. This work is expected to inspire the engineering of more hosts to respond and utilize erythritol for broad applications in metabolic engineering, synthetic biology, and biomedical engineering.https://doi.org/10.1002/advs.202207008carbon sourceerythritolEscherichia colimetabolic engineeringsynthetic biology
spellingShingle Fang Ba
Xiangyang Ji
Shuhui Huang
Yufei Zhang
Wan‐Qiu Liu
Yifan Liu
Shengjie Ling
Jian Li
Engineering Escherichia coli to Utilize Erythritol as Sole Carbon Source
Advanced Science
carbon source
erythritol
Escherichia coli
metabolic engineering
synthetic biology
title Engineering Escherichia coli to Utilize Erythritol as Sole Carbon Source
title_full Engineering Escherichia coli to Utilize Erythritol as Sole Carbon Source
title_fullStr Engineering Escherichia coli to Utilize Erythritol as Sole Carbon Source
title_full_unstemmed Engineering Escherichia coli to Utilize Erythritol as Sole Carbon Source
title_short Engineering Escherichia coli to Utilize Erythritol as Sole Carbon Source
title_sort engineering escherichia coli to utilize erythritol as sole carbon source
topic carbon source
erythritol
Escherichia coli
metabolic engineering
synthetic biology
url https://doi.org/10.1002/advs.202207008
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