In vivo genetic labeling of primary cilia in developing astrocytes

Abstract Background Astrocyte cilia are largely understudied due to the lack of available tools. Astrocyte research advanced with the establishment of Aldh1l1-Cre ERT2 , an inducible Cre line that specifically targets the astrocyte lineage. Here, we develop and compare genetic models that label astr...

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Main Authors: Rachel Bear, Claire Wei, Tamara Caspary
Format: Article
Language:English
Published: BMC 2025-07-01
Series:BMC Molecular and Cell Biology
Subjects:
Online Access:https://doi.org/10.1186/s12860-025-00547-7
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author Rachel Bear
Claire Wei
Tamara Caspary
author_facet Rachel Bear
Claire Wei
Tamara Caspary
author_sort Rachel Bear
collection DOAJ
description Abstract Background Astrocyte cilia are largely understudied due to the lack of available tools. Astrocyte research advanced with the establishment of Aldh1l1-Cre ERT2 , an inducible Cre line that specifically targets the astrocyte lineage. Here, we develop and compare genetic models that label astrocyte cilia in the developing prefrontal cortex (PFC) using Aldh1l1-Cre ERT2 and Cre-dependent cilia reporters. We evaluate these models by testing different tamoxifen-induction protocols and quantifying the percentage of astrocytes labeled with the cilia reporters. Results We show that tamoxifen dosage impacts the expression of cilia reporters in astrocytes. We uncover the maximum cilia-labeling efficiency using recombined, constitutively-expressed cilia reporters. Conclusion The data reveal that only a subset of SOX9- positive astrocytes in the PFC possess cilia throughout development. Our work highlights the utility of Cre-Lox systems to target specific cell types and the importance of carefully validating genetic models.
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issn 2661-8850
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spelling doaj-art-c95644a1b464424dbf8eac259326fa502025-08-20T04:02:41ZengBMCBMC Molecular and Cell Biology2661-88502025-07-012611510.1186/s12860-025-00547-7In vivo genetic labeling of primary cilia in developing astrocytesRachel Bear0Claire Wei1Tamara Caspary2Department of Human Genetics, Emory University School of MedicineDepartment of Human Genetics, Emory University School of MedicineDepartment of Human Genetics, Emory University School of MedicineAbstract Background Astrocyte cilia are largely understudied due to the lack of available tools. Astrocyte research advanced with the establishment of Aldh1l1-Cre ERT2 , an inducible Cre line that specifically targets the astrocyte lineage. Here, we develop and compare genetic models that label astrocyte cilia in the developing prefrontal cortex (PFC) using Aldh1l1-Cre ERT2 and Cre-dependent cilia reporters. We evaluate these models by testing different tamoxifen-induction protocols and quantifying the percentage of astrocytes labeled with the cilia reporters. Results We show that tamoxifen dosage impacts the expression of cilia reporters in astrocytes. We uncover the maximum cilia-labeling efficiency using recombined, constitutively-expressed cilia reporters. Conclusion The data reveal that only a subset of SOX9- positive astrocytes in the PFC possess cilia throughout development. Our work highlights the utility of Cre-Lox systems to target specific cell types and the importance of carefully validating genetic models.https://doi.org/10.1186/s12860-025-00547-7AstrocytesPrimary ciliaDevelopmentGenetic models
spellingShingle Rachel Bear
Claire Wei
Tamara Caspary
In vivo genetic labeling of primary cilia in developing astrocytes
BMC Molecular and Cell Biology
Astrocytes
Primary cilia
Development
Genetic models
title In vivo genetic labeling of primary cilia in developing astrocytes
title_full In vivo genetic labeling of primary cilia in developing astrocytes
title_fullStr In vivo genetic labeling of primary cilia in developing astrocytes
title_full_unstemmed In vivo genetic labeling of primary cilia in developing astrocytes
title_short In vivo genetic labeling of primary cilia in developing astrocytes
title_sort in vivo genetic labeling of primary cilia in developing astrocytes
topic Astrocytes
Primary cilia
Development
Genetic models
url https://doi.org/10.1186/s12860-025-00547-7
work_keys_str_mv AT rachelbear invivogeneticlabelingofprimaryciliaindevelopingastrocytes
AT clairewei invivogeneticlabelingofprimaryciliaindevelopingastrocytes
AT tamaracaspary invivogeneticlabelingofprimaryciliaindevelopingastrocytes