In vivo genetic labeling of primary cilia in developing astrocytes

Abstract Background Astrocyte cilia are largely understudied due to the lack of available tools. Astrocyte research advanced with the establishment of Aldh1l1-Cre ERT2 , an inducible Cre line that specifically targets the astrocyte lineage. Here, we develop and compare genetic models that label astr...

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Bibliographic Details
Main Authors: Rachel Bear, Claire Wei, Tamara Caspary
Format: Article
Language:English
Published: BMC 2025-07-01
Series:BMC Molecular and Cell Biology
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Online Access:https://doi.org/10.1186/s12860-025-00547-7
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Summary:Abstract Background Astrocyte cilia are largely understudied due to the lack of available tools. Astrocyte research advanced with the establishment of Aldh1l1-Cre ERT2 , an inducible Cre line that specifically targets the astrocyte lineage. Here, we develop and compare genetic models that label astrocyte cilia in the developing prefrontal cortex (PFC) using Aldh1l1-Cre ERT2 and Cre-dependent cilia reporters. We evaluate these models by testing different tamoxifen-induction protocols and quantifying the percentage of astrocytes labeled with the cilia reporters. Results We show that tamoxifen dosage impacts the expression of cilia reporters in astrocytes. We uncover the maximum cilia-labeling efficiency using recombined, constitutively-expressed cilia reporters. Conclusion The data reveal that only a subset of SOX9- positive astrocytes in the PFC possess cilia throughout development. Our work highlights the utility of Cre-Lox systems to target specific cell types and the importance of carefully validating genetic models.
ISSN:2661-8850