The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancer

Abstract Background Vitamin D is a fat-soluble vitamin that has a protective role in colorectal cancer. Several studies have identified the association between vitamin D and changes in DNA methylation in different types of tumours. Dickkopf-1 (DKK1) inhibits the Wnt/β-catenin signalling pathway, and...

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Main Authors: Hongyan Sun, Liehao Yang, Nan Li, Yue Hu, Qianying Hu, Zilong Zhou, Xianling Cong
Format: Article
Language:English
Published: BMC 2025-03-01
Series:Clinical Epigenetics
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Online Access:https://doi.org/10.1186/s13148-025-01857-5
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author Hongyan Sun
Liehao Yang
Nan Li
Yue Hu
Qianying Hu
Zilong Zhou
Xianling Cong
author_facet Hongyan Sun
Liehao Yang
Nan Li
Yue Hu
Qianying Hu
Zilong Zhou
Xianling Cong
author_sort Hongyan Sun
collection DOAJ
description Abstract Background Vitamin D is a fat-soluble vitamin that has a protective role in colorectal cancer. Several studies have identified the association between vitamin D and changes in DNA methylation in different types of tumours. Dickkopf-1 (DKK1) inhibits the Wnt/β-catenin signalling pathway, and 1,25(OH)2D3 can induce DKK1 expression in colorectal cancer. However, whether 1,25(OH)2D3 can affect DKK1 expression by regulating DNA methylation in colorectal cancer is not known. Methods Fifty-seven colorectal cancer (CRC) patients and fifty-five healthy controls were included in this study. Serum DKK1 and 25(OH)D levels were measured via ELISA and liquid chromatography‒tandem mass spectrometry, respectively, and the associations of DKK1 with clinicopathological characteristics and 25(OH)D were analysed. A DKK1 expression plasmid was transfected into cells to assess the functional significance of DKK1 in CRC progression via CCK8, wound healing and migration assays. BiSulphite Amplicon Sequencing (BSAS) and methylation-specific PCR were used to detect the DKK1 methylation status of colorectal cancer cells and tissues. The effect of 1,25(OH)2D3 on DKK1 methylation was investigated by pyrosequencing. A dual-luciferase reporter assay was performed to investigate the influence of CpG island methylation on DKK1 transcriptional activity. Results A decreased serum DKK1 level was closely associated with nerve infiltration and 25(OH)D status in patients with colorectal cancer. Overexpression of DKK1 reduced the proliferative and migratory capabilities of colorectal cancer cells. The methylation patterns of DKK1 (− 195 to + 231), including 31 CpG sites, were assayed via BSAS in CRC cells and tissues. Compared with those in adjacent normal tissues, the methylation levels of multiple CpG sites located in the promoter, 5’UTR and exon 1 were increased in tumour tissues. DKK1 hypermethylation was associated with decreased DKK1 expression in colorectal cancer cells and tissues. 1,25(OH)2D3 induced DKK1 expression in colorectal cancer cells, and pyrosequencing revealed that 1,25(OH)2D3 treatment induced demethylation of CpG sites located in the promoter (− 97 to − 32) and 5’UTR (+ 39 to + 97). The dual-luciferase reporter assay further confirmed that CpG island methylation (-120 to + 225) directly represses DKK1 transcription. Conclusion DKK1 functions as a tumour suppressor in colorectal cancer, and 1,25(OH)2D3 upregulates DKK1 expression by inducing demethylation of the DKK1 promoter and 5’UTR in specific colorectal cancer cell lines.
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spelling doaj-art-c882abdf7eef4d96a1ba7b628f2382402025-08-20T02:10:10ZengBMCClinical Epigenetics1868-70832025-03-0117111210.1186/s13148-025-01857-5The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancerHongyan Sun0Liehao Yang1Nan Li2Yue Hu3Qianying Hu4Zilong Zhou5Xianling Cong6Department of Biobank, China-Japan Union Hospital of Jilin UniversityDepartment of Dermatology, China-Japan Union Hospital of Jilin UniversityDepartment of Gynecology, The First Hospital of Jilin UniversityDepartment of Biobank, China-Japan Union Hospital of Jilin UniversityDepartment of Biobank, China-Japan Union Hospital of Jilin UniversityDepartment of Biobank, China-Japan Union Hospital of Jilin UniversityDepartment of Biobank, China-Japan Union Hospital of Jilin UniversityAbstract Background Vitamin D is a fat-soluble vitamin that has a protective role in colorectal cancer. Several studies have identified the association between vitamin D and changes in DNA methylation in different types of tumours. Dickkopf-1 (DKK1) inhibits the Wnt/β-catenin signalling pathway, and 1,25(OH)2D3 can induce DKK1 expression in colorectal cancer. However, whether 1,25(OH)2D3 can affect DKK1 expression by regulating DNA methylation in colorectal cancer is not known. Methods Fifty-seven colorectal cancer (CRC) patients and fifty-five healthy controls were included in this study. Serum DKK1 and 25(OH)D levels were measured via ELISA and liquid chromatography‒tandem mass spectrometry, respectively, and the associations of DKK1 with clinicopathological characteristics and 25(OH)D were analysed. A DKK1 expression plasmid was transfected into cells to assess the functional significance of DKK1 in CRC progression via CCK8, wound healing and migration assays. BiSulphite Amplicon Sequencing (BSAS) and methylation-specific PCR were used to detect the DKK1 methylation status of colorectal cancer cells and tissues. The effect of 1,25(OH)2D3 on DKK1 methylation was investigated by pyrosequencing. A dual-luciferase reporter assay was performed to investigate the influence of CpG island methylation on DKK1 transcriptional activity. Results A decreased serum DKK1 level was closely associated with nerve infiltration and 25(OH)D status in patients with colorectal cancer. Overexpression of DKK1 reduced the proliferative and migratory capabilities of colorectal cancer cells. The methylation patterns of DKK1 (− 195 to + 231), including 31 CpG sites, were assayed via BSAS in CRC cells and tissues. Compared with those in adjacent normal tissues, the methylation levels of multiple CpG sites located in the promoter, 5’UTR and exon 1 were increased in tumour tissues. DKK1 hypermethylation was associated with decreased DKK1 expression in colorectal cancer cells and tissues. 1,25(OH)2D3 induced DKK1 expression in colorectal cancer cells, and pyrosequencing revealed that 1,25(OH)2D3 treatment induced demethylation of CpG sites located in the promoter (− 97 to − 32) and 5’UTR (+ 39 to + 97). The dual-luciferase reporter assay further confirmed that CpG island methylation (-120 to + 225) directly represses DKK1 transcription. Conclusion DKK1 functions as a tumour suppressor in colorectal cancer, and 1,25(OH)2D3 upregulates DKK1 expression by inducing demethylation of the DKK1 promoter and 5’UTR in specific colorectal cancer cell lines.https://doi.org/10.1186/s13148-025-01857-51,25(OH)2D3DNA methylationDKK1Colorectal cancer
spellingShingle Hongyan Sun
Liehao Yang
Nan Li
Yue Hu
Qianying Hu
Zilong Zhou
Xianling Cong
The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancer
Clinical Epigenetics
1,25(OH)2D3
DNA methylation
DKK1
Colorectal cancer
title The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancer
title_full The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancer
title_fullStr The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancer
title_full_unstemmed The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancer
title_short The effect of 1,25(OH)2D3 on Dickkopf-1 methylation in colorectal cancer
title_sort effect of 1 25 oh 2d3 on dickkopf 1 methylation in colorectal cancer
topic 1,25(OH)2D3
DNA methylation
DKK1
Colorectal cancer
url https://doi.org/10.1186/s13148-025-01857-5
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