Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, Peru

Pollution from crude oil and its derivatives poses a serious threat to human health and ecosystems, with accidental spills causing substantial damage. Biodegradation, using microorganisms to break down these contaminants, presents a promising and cost-effective solution. Exploring and utilizing new...

Full description

Saved in:
Bibliographic Details
Main Authors: Claudio Quiñones-Cerna, Alina Castañeda-Aspajo, Marycielo Tirado-Gutierrez, David Salirrosas-Fernández, Juan Carlos Rodríguez-Soto, José Alfredo Cruz-Monzón, Fernando Hurtado-Butrón, Wilmer Ugarte-López, Mayra Gutiérrez-Araujo, Medardo Alberto Quezada-Alvarez, Julieta Alessandra Gálvez-Rivera, Mario Esparza-Mantilla
Format: Article
Language:English
Published: MDPI AG 2024-09-01
Series:Microorganisms
Subjects:
Online Access:https://www.mdpi.com/2076-2607/12/9/1896
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1850260211039731712
author Claudio Quiñones-Cerna
Alina Castañeda-Aspajo
Marycielo Tirado-Gutierrez
David Salirrosas-Fernández
Juan Carlos Rodríguez-Soto
José Alfredo Cruz-Monzón
Fernando Hurtado-Butrón
Wilmer Ugarte-López
Mayra Gutiérrez-Araujo
Medardo Alberto Quezada-Alvarez
Julieta Alessandra Gálvez-Rivera
Mario Esparza-Mantilla
author_facet Claudio Quiñones-Cerna
Alina Castañeda-Aspajo
Marycielo Tirado-Gutierrez
David Salirrosas-Fernández
Juan Carlos Rodríguez-Soto
José Alfredo Cruz-Monzón
Fernando Hurtado-Butrón
Wilmer Ugarte-López
Mayra Gutiérrez-Araujo
Medardo Alberto Quezada-Alvarez
Julieta Alessandra Gálvez-Rivera
Mario Esparza-Mantilla
author_sort Claudio Quiñones-Cerna
collection DOAJ
description Pollution from crude oil and its derivatives poses a serious threat to human health and ecosystems, with accidental spills causing substantial damage. Biodegradation, using microorganisms to break down these contaminants, presents a promising and cost-effective solution. Exploring and utilizing new bacterial strains from underexplored habitats could improve remediation efforts at contaminated sites. This study aimed to evaluate the hydrocarbon biodegradation capacity of bacteria isolated from agricultural soils in Huamachuco, Peru. Soil samples from Oca crops were collected and bacteria were isolated. Biodegradation assays were conducted using diesel as the sole carbon source in the Bushnell Haas Mineral medium. Molecular characterization of the 16S rRNA gene identified four strains. Diesel biodegradation assays at 1% concentration were performed under agitation conditions at 150 rpm and 30 °C, and monitored on day 10 by measuring cellular biomass (OD<sub>600</sub>), with hydrocarbons analyzed by gas chromatography. The results showed <i>Pseudomonas protegens</i> (PROM2) achieved the highest efficiency in removing total hydrocarbons (91.5 ± 0.7%). Additionally, <i>Pseudomonas citri</i> PROM3 and <i>Acinetobacter guillouiae</i> ClyRoM5 also demonstrated high capacity in removing several individual hydrocarbons. Indigenous bacteria from uncontaminated agricultural soils present a high potential for hydrocarbon bioremediation, offering an ecological and effective solution for soil decontamination.
format Article
id doaj-art-c7b65f7bdec3467f9dae293adad84673
institution OA Journals
issn 2076-2607
language English
publishDate 2024-09-01
publisher MDPI AG
record_format Article
series Microorganisms
spelling doaj-art-c7b65f7bdec3467f9dae293adad846732025-08-20T01:55:41ZengMDPI AGMicroorganisms2076-26072024-09-01129189610.3390/microorganisms12091896Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, PeruClaudio Quiñones-Cerna0Alina Castañeda-Aspajo1Marycielo Tirado-Gutierrez2David Salirrosas-Fernández3Juan Carlos Rodríguez-Soto4José Alfredo Cruz-Monzón5Fernando Hurtado-Butrón6Wilmer Ugarte-López7Mayra Gutiérrez-Araujo8Medardo Alberto Quezada-Alvarez9Julieta Alessandra Gálvez-Rivera10Mario Esparza-Mantilla11Laboratorio de Biotecnología e Ingeniería Genética, Facultad de Ciencias Biológicas, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruDepartamento de Ingeniería Ambiental, Facultad de Ingeniería Química, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruDepartamento de Ingeniería Ambiental, Facultad de Ingeniería Química, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruLaboratorio de Citometría, Facultad de Ciencias Biológicas, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruLaboratorio de Citometría, Facultad de Ciencias Biológicas, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruDepartamento de Química, Facultad de Ingeniería Química, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruLaboratorio Multidisciplinario de Nanociencia y Nanotecnología “Oswaldo Sánchez Rosales”, Facultad de Ciencias Físicas y Matemáticas, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruDepartamento de Ingeniería Ambiental, Facultad de Ingeniería Química, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruLaboratorio de Citometría, Facultad de Ciencias Biológicas, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruLaboratorio de Investigación y Desarrollo en Ciencias Ambientales, Facultad de Ingeniería Química, Universidad Nacional de Trujillo, Juan Pablo II Av., Trujillo 13008, PeruEscuela Profesional de Ciencias Biológicas, Facultad de Ciencias, Universidad Nacional de Piura, Juan Pablo II Av., Trujillo 13008, PeruFundación Internacional para la Cultura y Ciencias de la Vida, Iquique 1100000, ChilePollution from crude oil and its derivatives poses a serious threat to human health and ecosystems, with accidental spills causing substantial damage. Biodegradation, using microorganisms to break down these contaminants, presents a promising and cost-effective solution. Exploring and utilizing new bacterial strains from underexplored habitats could improve remediation efforts at contaminated sites. This study aimed to evaluate the hydrocarbon biodegradation capacity of bacteria isolated from agricultural soils in Huamachuco, Peru. Soil samples from Oca crops were collected and bacteria were isolated. Biodegradation assays were conducted using diesel as the sole carbon source in the Bushnell Haas Mineral medium. Molecular characterization of the 16S rRNA gene identified four strains. Diesel biodegradation assays at 1% concentration were performed under agitation conditions at 150 rpm and 30 °C, and monitored on day 10 by measuring cellular biomass (OD<sub>600</sub>), with hydrocarbons analyzed by gas chromatography. The results showed <i>Pseudomonas protegens</i> (PROM2) achieved the highest efficiency in removing total hydrocarbons (91.5 ± 0.7%). Additionally, <i>Pseudomonas citri</i> PROM3 and <i>Acinetobacter guillouiae</i> ClyRoM5 also demonstrated high capacity in removing several individual hydrocarbons. Indigenous bacteria from uncontaminated agricultural soils present a high potential for hydrocarbon bioremediation, offering an ecological and effective solution for soil decontamination.https://www.mdpi.com/2076-2607/12/9/1896biotechnologybioremediationmitigationbiodegradationdieselhydrocarbons
spellingShingle Claudio Quiñones-Cerna
Alina Castañeda-Aspajo
Marycielo Tirado-Gutierrez
David Salirrosas-Fernández
Juan Carlos Rodríguez-Soto
José Alfredo Cruz-Monzón
Fernando Hurtado-Butrón
Wilmer Ugarte-López
Mayra Gutiérrez-Araujo
Medardo Alberto Quezada-Alvarez
Julieta Alessandra Gálvez-Rivera
Mario Esparza-Mantilla
Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, Peru
Microorganisms
biotechnology
bioremediation
mitigation
biodegradation
diesel
hydrocarbons
title Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, Peru
title_full Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, Peru
title_fullStr Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, Peru
title_full_unstemmed Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, Peru
title_short Efficacy of Indigenous Bacteria in the Biodegradation of Hydrocarbons Isolated from Agricultural Soils in Huamachuco, Peru
title_sort efficacy of indigenous bacteria in the biodegradation of hydrocarbons isolated from agricultural soils in huamachuco peru
topic biotechnology
bioremediation
mitigation
biodegradation
diesel
hydrocarbons
url https://www.mdpi.com/2076-2607/12/9/1896
work_keys_str_mv AT claudioquinonescerna efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT alinacastanedaaspajo efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT marycielotiradogutierrez efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT davidsalirrosasfernandez efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT juancarlosrodriguezsoto efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT josealfredocruzmonzon efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT fernandohurtadobutron efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT wilmerugartelopez efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT mayragutierrezaraujo efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT medardoalbertoquezadaalvarez efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT julietaalessandragalvezrivera efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu
AT marioesparzamantilla efficacyofindigenousbacteriainthebiodegradationofhydrocarbonsisolatedfromagriculturalsoilsinhuamachucoperu