Biodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processes

Abstract Background Poly-3-hydroxybutyrate (P3HB) is a biodegradable plastic that may affect soil quality and plant growth. To explain the observed deterioration of plant growth, this study investigated the effects of P3HB microplastics on the soil microbiome and its activity related to content of n...

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Main Authors: Martin Brtnicky, Jiri Holatko, Marek Koutny, Jiri Kucerik, Tereza Hammerschmiedt, Tivadar Baltazar, Jana Sera, Antonin Kintl, Vaclav Pecina
Format: Article
Language:English
Published: SpringerOpen 2025-07-01
Series:Chemical and Biological Technologies in Agriculture
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Online Access:https://doi.org/10.1186/s40538-025-00814-x
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author Martin Brtnicky
Jiri Holatko
Marek Koutny
Jiri Kucerik
Tereza Hammerschmiedt
Tivadar Baltazar
Jana Sera
Antonin Kintl
Vaclav Pecina
author_facet Martin Brtnicky
Jiri Holatko
Marek Koutny
Jiri Kucerik
Tereza Hammerschmiedt
Tivadar Baltazar
Jana Sera
Antonin Kintl
Vaclav Pecina
author_sort Martin Brtnicky
collection DOAJ
description Abstract Background Poly-3-hydroxybutyrate (P3HB) is a biodegradable plastic that may affect soil quality and plant growth. To explain the observed deterioration of plant growth, this study investigated the effects of P3HB microplastics on the soil microbiome and its activity related to content of nutrients and their transformation processes. A pot experiment was conducted using soil contaminated with five different doses of P3HB, both with and without maize. Soil mineral nitrogen forms, microbial properties as well as plant biomass were determined. Results P3HB significantly altered soil properties by stimulating microbial respiration, enhancing carbon turnover, and shifting nitrogen forms, notably reducing NO₃⁻ availability. The fungal community was more sensitive to P3HB compared to the bacterial one. Fungal genera such as Tetracladium, Exophiala, and Pseudogymnoascus were stimulated; others such as Gibberella and Gibellulopsis declined. In the bacterial community, P3HB promoted the growth of copiotrophic P3HB degraders (e.g., Actinobacteria, Alphaproteobacteria); increased the abundance of anaerobes (Clostridia); decreased nitrifying groups (Nitrososphaeria, Nitrospiria); and reduced oligotrophic taxa (Vicinamibacteria, Thermoleophilia). These changes led to altered nutrient cycling, including inhibited nitrification and reduced mineral nitrogen availability, contributing to decreased maize growth. Conclusions Soil contamination with ≥ 1% P3HB microplastics disrupts microbial structure and nutrient dynamics, with potential negative effects on soil fertility and plant productivity. Graphical abstract
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spelling doaj-art-c73125328ff7432ea35b4b60db3cd4a42025-08-20T04:01:53ZengSpringerOpenChemical and Biological Technologies in Agriculture2196-56412025-07-0112111910.1186/s40538-025-00814-xBiodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processesMartin Brtnicky0Jiri Holatko1Marek Koutny2Jiri Kucerik3Tereza Hammerschmiedt4Tivadar Baltazar5Jana Sera6Antonin Kintl7Vaclav Pecina8Department of Agrochemistry, Soil Science, Microbiology and Plant Nutrition, Faculty of AgriSciences, Mendel University in BrnoDepartment of Agrochemistry, Soil Science, Microbiology and Plant Nutrition, Faculty of AgriSciences, Mendel University in BrnoDepartment of Environmental Protection Engineering, Faculty of Technology, Tomas Bata University in ZlinDepartment of Agrochemistry, Soil Science, Microbiology and Plant Nutrition, Faculty of AgriSciences, Mendel University in BrnoDepartment of Agrochemistry, Soil Science, Microbiology and Plant Nutrition, Faculty of AgriSciences, Mendel University in BrnoDepartment of Agrochemistry, Soil Science, Microbiology and Plant Nutrition, Faculty of AgriSciences, Mendel University in BrnoDepartment of Environmental Protection Engineering, Faculty of Technology, Tomas Bata University in ZlinDepartment of Agrochemistry, Soil Science, Microbiology and Plant Nutrition, Faculty of AgriSciences, Mendel University in BrnoDepartment of Forest Ecology, Faculty of Forestry and Wood Technology, Mendel University in BrnoAbstract Background Poly-3-hydroxybutyrate (P3HB) is a biodegradable plastic that may affect soil quality and plant growth. To explain the observed deterioration of plant growth, this study investigated the effects of P3HB microplastics on the soil microbiome and its activity related to content of nutrients and their transformation processes. A pot experiment was conducted using soil contaminated with five different doses of P3HB, both with and without maize. Soil mineral nitrogen forms, microbial properties as well as plant biomass were determined. Results P3HB significantly altered soil properties by stimulating microbial respiration, enhancing carbon turnover, and shifting nitrogen forms, notably reducing NO₃⁻ availability. The fungal community was more sensitive to P3HB compared to the bacterial one. Fungal genera such as Tetracladium, Exophiala, and Pseudogymnoascus were stimulated; others such as Gibberella and Gibellulopsis declined. In the bacterial community, P3HB promoted the growth of copiotrophic P3HB degraders (e.g., Actinobacteria, Alphaproteobacteria); increased the abundance of anaerobes (Clostridia); decreased nitrifying groups (Nitrososphaeria, Nitrospiria); and reduced oligotrophic taxa (Vicinamibacteria, Thermoleophilia). These changes led to altered nutrient cycling, including inhibited nitrification and reduced mineral nitrogen availability, contributing to decreased maize growth. Conclusions Soil contamination with ≥ 1% P3HB microplastics disrupts microbial structure and nutrient dynamics, with potential negative effects on soil fertility and plant productivity. Graphical abstracthttps://doi.org/10.1186/s40538-025-00814-xBiodegradable plasticsBacteriaFungiNitrificationSoil nitrogen
spellingShingle Martin Brtnicky
Jiri Holatko
Marek Koutny
Jiri Kucerik
Tereza Hammerschmiedt
Tivadar Baltazar
Jana Sera
Antonin Kintl
Vaclav Pecina
Biodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processes
Chemical and Biological Technologies in Agriculture
Biodegradable plastics
Bacteria
Fungi
Nitrification
Soil nitrogen
title Biodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processes
title_full Biodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processes
title_fullStr Biodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processes
title_full_unstemmed Biodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processes
title_short Biodegradable microplastics impact on soil: how poly-3-hydroxybutyrate alters microbial diversity and nitrogen mineralization processes
title_sort biodegradable microplastics impact on soil how poly 3 hydroxybutyrate alters microbial diversity and nitrogen mineralization processes
topic Biodegradable plastics
Bacteria
Fungi
Nitrification
Soil nitrogen
url https://doi.org/10.1186/s40538-025-00814-x
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