Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu

Abstract The fermentation process of strong-flavor Baijiu represents a complex and unique ecosystem, characterized by the involvement of various microorganisms that drive intricate biochemical reactions, ultimately contributing to the distinct flavor profile of the Baijiu. Viruses may affect the suc...

Full description

Saved in:
Bibliographic Details
Main Authors: Huadong Zhang, Hongxia Zhang, Hai Du, Yan Zhang, Menghui Zhang, Xiaowei Yu, Yan Xu
Format: Article
Language:English
Published: SpringerOpen 2025-03-01
Series:Bioresources and Bioprocessing
Subjects:
Online Access:https://doi.org/10.1186/s40643-025-00852-1
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1849761630057922560
author Huadong Zhang
Hongxia Zhang
Hai Du
Yan Zhang
Menghui Zhang
Xiaowei Yu
Yan Xu
author_facet Huadong Zhang
Hongxia Zhang
Hai Du
Yan Zhang
Menghui Zhang
Xiaowei Yu
Yan Xu
author_sort Huadong Zhang
collection DOAJ
description Abstract The fermentation process of strong-flavor Baijiu represents a complex and unique ecosystem, characterized by the involvement of various microorganisms that drive intricate biochemical reactions, ultimately contributing to the distinct flavor profile of the Baijiu. Viruses may affect the succession of microorganisms and thus affect the style and quality of the product. However, the interaction between viruses and microorganisms during the fermentation of Baijiu is still unclear. Here we combined viral metagenomics and amplicon sequencing, physicochemical analysis, and GC–MS detection with temporal sampling to study the dynamics of viral and microbial communities, physicochemical properties, and flavor compounds during strong-flavor Baijiu fermentation. Viral metagenomic analysis revealed 513 viral operational taxonomic units (vOTUs), encompassing 34 viral families. Principal coordinates analysis (PCoA) demonstrated significant differences in vOTUs at different fermentation stages. Notably, the microbial community exhibited distinct succession patterns at various fermentation stages; it changed rapidly during the initial five days, with similarities observed between days 10 and 20. Volatile profile analysis identified 38 flavor components in fermented grains, comprising 16 ester compounds, 11 alcohols, and 8 acids, with the majority formed between days 10 and 30. The Spearman's rank correlation analysis revealed that Peduoviridae exhibited a negative correlation with Gluconobacter. Genomoviridae showed a negative correlation with Issatchenkia, Penicillium, and Monascus. These findings highlight the potential for complex interactions between viruses and microbial communities during Baijiu fermentation, underscoring the importance of considering viral communities in studies of the microbial ecology of fermented foods. Graphical Abstract
format Article
id doaj-art-bb3ebc26c33c40bb9b839143e91f7e5f
institution DOAJ
issn 2197-4365
language English
publishDate 2025-03-01
publisher SpringerOpen
record_format Article
series Bioresources and Bioprocessing
spelling doaj-art-bb3ebc26c33c40bb9b839143e91f7e5f2025-08-20T03:05:57ZengSpringerOpenBioresources and Bioprocessing2197-43652025-03-0112111910.1186/s40643-025-00852-1Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor BaijiuHuadong Zhang0Hongxia Zhang1Hai Du2Yan Zhang3Menghui Zhang4Xiaowei Yu5Yan Xu6Laboratory of Brewing Microbiology and Applied Enzymology, The Key Laboratory of Industrial Biotechnology, Ministry of Education, State Key Laboratory of Food Science and Technology, School of Biotechnology, Jiangnan UniversityCollege of Life Sciences, Shanxi Normal UniversityLaboratory of Brewing Microbiology and Applied Enzymology, The Key Laboratory of Industrial Biotechnology, Ministry of Education, State Key Laboratory of Food Science and Technology, School of Biotechnology, Jiangnan UniversityKey Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong UniversityState Key Laboratory of Microbial Metabolism, Shanghai Jiao Tong UniversityLaboratory of Brewing Microbiology and Applied Enzymology, The Key Laboratory of Industrial Biotechnology, Ministry of Education, State Key Laboratory of Food Science and Technology, School of Biotechnology, Jiangnan UniversityLaboratory of Brewing Microbiology and Applied Enzymology, The Key Laboratory of Industrial Biotechnology, Ministry of Education, State Key Laboratory of Food Science and Technology, School of Biotechnology, Jiangnan UniversityAbstract The fermentation process of strong-flavor Baijiu represents a complex and unique ecosystem, characterized by the involvement of various microorganisms that drive intricate biochemical reactions, ultimately contributing to the distinct flavor profile of the Baijiu. Viruses may affect the succession of microorganisms and thus affect the style and quality of the product. However, the interaction between viruses and microorganisms during the fermentation of Baijiu is still unclear. Here we combined viral metagenomics and amplicon sequencing, physicochemical analysis, and GC–MS detection with temporal sampling to study the dynamics of viral and microbial communities, physicochemical properties, and flavor compounds during strong-flavor Baijiu fermentation. Viral metagenomic analysis revealed 513 viral operational taxonomic units (vOTUs), encompassing 34 viral families. Principal coordinates analysis (PCoA) demonstrated significant differences in vOTUs at different fermentation stages. Notably, the microbial community exhibited distinct succession patterns at various fermentation stages; it changed rapidly during the initial five days, with similarities observed between days 10 and 20. Volatile profile analysis identified 38 flavor components in fermented grains, comprising 16 ester compounds, 11 alcohols, and 8 acids, with the majority formed between days 10 and 30. The Spearman's rank correlation analysis revealed that Peduoviridae exhibited a negative correlation with Gluconobacter. Genomoviridae showed a negative correlation with Issatchenkia, Penicillium, and Monascus. These findings highlight the potential for complex interactions between viruses and microbial communities during Baijiu fermentation, underscoring the importance of considering viral communities in studies of the microbial ecology of fermented foods. Graphical Abstracthttps://doi.org/10.1186/s40643-025-00852-1BaijiuVirusBacteriaFungalViral metagenomicsFermented foods
spellingShingle Huadong Zhang
Hongxia Zhang
Hai Du
Yan Zhang
Menghui Zhang
Xiaowei Yu
Yan Xu
Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu
Bioresources and Bioprocessing
Baijiu
Virus
Bacteria
Fungal
Viral metagenomics
Fermented foods
title Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu
title_full Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu
title_fullStr Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu
title_full_unstemmed Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu
title_short Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu
title_sort unraveling the multiple interactions between phages microbes and flavor in the fermentation of strong flavor baijiu
topic Baijiu
Virus
Bacteria
Fungal
Viral metagenomics
Fermented foods
url https://doi.org/10.1186/s40643-025-00852-1
work_keys_str_mv AT huadongzhang unravelingthemultipleinteractionsbetweenphagesmicrobesandflavorinthefermentationofstrongflavorbaijiu
AT hongxiazhang unravelingthemultipleinteractionsbetweenphagesmicrobesandflavorinthefermentationofstrongflavorbaijiu
AT haidu unravelingthemultipleinteractionsbetweenphagesmicrobesandflavorinthefermentationofstrongflavorbaijiu
AT yanzhang unravelingthemultipleinteractionsbetweenphagesmicrobesandflavorinthefermentationofstrongflavorbaijiu
AT menghuizhang unravelingthemultipleinteractionsbetweenphagesmicrobesandflavorinthefermentationofstrongflavorbaijiu
AT xiaoweiyu unravelingthemultipleinteractionsbetweenphagesmicrobesandflavorinthefermentationofstrongflavorbaijiu
AT yanxu unravelingthemultipleinteractionsbetweenphagesmicrobesandflavorinthefermentationofstrongflavorbaijiu