The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trial

Abstract Background The aetiology of Crohn’s disease, a chronic inflammatory bowel disease, is multifactorial and not completely understood. However, the association with gut dysbiosis is well-established, and manipulation of the gut microbiota has gained interest as a treatment strategy. This study...

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Main Authors: Ida Marie Bruun Grønbæk, Sofie Ingdam Halkjær, Sarah Mollerup, Esben Holm Hansen, Sarah Juel Paulsen, Sara Engel, Klaus Theede, Rune Wilkens, Trine Boysen, Andreas Munk Petersen
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Language:English
Published: BMC 2025-04-01
Series:Gut Pathogens
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Online Access:https://doi.org/10.1186/s13099-025-00692-6
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author Ida Marie Bruun Grønbæk
Sofie Ingdam Halkjær
Sarah Mollerup
Esben Holm Hansen
Sarah Juel Paulsen
Sara Engel
Klaus Theede
Rune Wilkens
Trine Boysen
Andreas Munk Petersen
author_facet Ida Marie Bruun Grønbæk
Sofie Ingdam Halkjær
Sarah Mollerup
Esben Holm Hansen
Sarah Juel Paulsen
Sara Engel
Klaus Theede
Rune Wilkens
Trine Boysen
Andreas Munk Petersen
author_sort Ida Marie Bruun Grønbæk
collection DOAJ
description Abstract Background The aetiology of Crohn’s disease, a chronic inflammatory bowel disease, is multifactorial and not completely understood. However, the association with gut dysbiosis is well-established, and manipulation of the gut microbiota has gained interest as a treatment strategy. This study aimed to investigate the effects of the probiotic strain Bifidobacterium breve, Bif195™ (Bif195) on intestinal inflammation, symptoms, and the gut microbiome composition in patients with small intestinal Crohn’s disease. Methods This was a randomised, double-blind, placebo-controlled trial. Thirty-three patients with small intestinal Crohn’s disease were assigned to eight weeks of treatment with Bif195 or placebo (1:1). The primary outcome was changes in bowel wall thickness measured by intestinal ultrasonography. Other outcomes were changes in symptom severity, quality of life, faecal calprotectin, fatigue, and specific inflammatory parameters on ultrasonography. Changes in the microbiome composition were also examined. Results Bif195 did not affect the bowel wall thickness in the small intestine compared to placebo. Nor did we observe effects on secondary or clinical explorative outcomes. Analysis of the gut microbiome showed that the relative abundance of B. breve rose during the intervention in the Bif195 group, but the result was statistically non-significant. Surprisingly, we observed a clustering of baseline microbiome data into two groups that differed in several aspects including a statistically significant difference in the incidence of previous bowel resections among the participants. Furthermore, changes in symptom scores after eight weeks of intervention were significantly different across the two microbiome groups, with an interaction effect of p = 0.04. Conclusions Eight weeks of treatment with Bif195 did not affect clinical outcomes for Crohn’s disease. However, variations in baseline microbiome data influenced the results. This underscores the importance of assessing baseline microbiome data in intervention studies in Crohn’s disease. Clinicaltrials.gov NCT04842149
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spelling doaj-art-badd926ee40e4f8986b02ad6a3dea3912025-08-20T03:10:17ZengBMCGut Pathogens1757-47492025-04-0117111510.1186/s13099-025-00692-6The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trialIda Marie Bruun Grønbæk0Sofie Ingdam Halkjær1Sarah Mollerup2Esben Holm Hansen3Sarah Juel Paulsen4Sara Engel5Klaus Theede6Rune Wilkens7Trine Boysen8Andreas Munk Petersen9Gastrounit, Medical Section, Copenhagen University Hospital, Amager and HvidovreGastrounit, Medical Section, Copenhagen University Hospital, Amager and HvidovreDepartment of Clinical Microbiology, Copenhagen University Hospital, Amager and HvidovreGastrounit, Medical Section, Copenhagen University Hospital, Amager and HvidovreDepartment of Clinical Microbiology, Copenhagen University Hospital, Amager and HvidovreChr. Hansen A/S, Part of NovonesisGastrounit, Medical Section, Copenhagen University Hospital, Amager and HvidovreDigestive Disease Center, Copenhagen University Hospital BispebjergGastrounit, Medical Section, Copenhagen University Hospital, Amager and HvidovreGastrounit, Medical Section, Copenhagen University Hospital, Amager and HvidovreAbstract Background The aetiology of Crohn’s disease, a chronic inflammatory bowel disease, is multifactorial and not completely understood. However, the association with gut dysbiosis is well-established, and manipulation of the gut microbiota has gained interest as a treatment strategy. This study aimed to investigate the effects of the probiotic strain Bifidobacterium breve, Bif195™ (Bif195) on intestinal inflammation, symptoms, and the gut microbiome composition in patients with small intestinal Crohn’s disease. Methods This was a randomised, double-blind, placebo-controlled trial. Thirty-three patients with small intestinal Crohn’s disease were assigned to eight weeks of treatment with Bif195 or placebo (1:1). The primary outcome was changes in bowel wall thickness measured by intestinal ultrasonography. Other outcomes were changes in symptom severity, quality of life, faecal calprotectin, fatigue, and specific inflammatory parameters on ultrasonography. Changes in the microbiome composition were also examined. Results Bif195 did not affect the bowel wall thickness in the small intestine compared to placebo. Nor did we observe effects on secondary or clinical explorative outcomes. Analysis of the gut microbiome showed that the relative abundance of B. breve rose during the intervention in the Bif195 group, but the result was statistically non-significant. Surprisingly, we observed a clustering of baseline microbiome data into two groups that differed in several aspects including a statistically significant difference in the incidence of previous bowel resections among the participants. Furthermore, changes in symptom scores after eight weeks of intervention were significantly different across the two microbiome groups, with an interaction effect of p = 0.04. Conclusions Eight weeks of treatment with Bif195 did not affect clinical outcomes for Crohn’s disease. However, variations in baseline microbiome data influenced the results. This underscores the importance of assessing baseline microbiome data in intervention studies in Crohn’s disease. Clinicaltrials.gov NCT04842149https://doi.org/10.1186/s13099-025-00692-6Crohn’s diseaseGut microbiotaProbiotic treatmentBifidobacterium breveBif195™Shotgun metagenomics
spellingShingle Ida Marie Bruun Grønbæk
Sofie Ingdam Halkjær
Sarah Mollerup
Esben Holm Hansen
Sarah Juel Paulsen
Sara Engel
Klaus Theede
Rune Wilkens
Trine Boysen
Andreas Munk Petersen
The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trial
Gut Pathogens
Crohn’s disease
Gut microbiota
Probiotic treatment
Bifidobacterium breve
Bif195™
Shotgun metagenomics
title The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trial
title_full The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trial
title_fullStr The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trial
title_full_unstemmed The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trial
title_short The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn’s disease and the gut microbiome: results from a randomised, double-blind, placebo-controlled trial
title_sort effects of probiotic treatment with bifidobacterium breve bif195 for small intestinal crohn s disease and the gut microbiome results from a randomised double blind placebo controlled trial
topic Crohn’s disease
Gut microbiota
Probiotic treatment
Bifidobacterium breve
Bif195™
Shotgun metagenomics
url https://doi.org/10.1186/s13099-025-00692-6
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