Time-course RNA-seq analysis of upland cotton (Gossypium hirsutum L.) responses to Southern root-knot nematode (Meloidogyne incognita) during compatible and incompatible interactions

Time-course RNA-seq analysis of upland cotton (Gossypium hirsutum L.) responses to Southern root-knot nematode (Meloidogyne incognita) during compatible and incompatible interactions

Abstract Background The Southern root-knot nematode (Meloidogyne incognita) poses a substantial threat to cotton (Gossypium hirsutum L.) by causing significant agricultural losses. Host plant resistance is the most plausible approach for minimizing these losses. QTL mapping and early transcriptomic...

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Bibliographic Details
Main Authors: Sameer Khanal, Pawan Kumar, Mychele B. da Silva, Rippy Singh, Nelson Suassuna, Don C. Jones, Richard F. Davis, Peng W. Chee
Format: Article
Language:English
Published: BMC 2025-02-01
Series:BMC Genomics
Subjects:
Comparative transcriptomics
Host-parasite interaction
Host plant resistance
Differentially expressed genes and pathways
Cotton molecular breeding
Online Access:https://doi.org/10.1186/s12864-025-11339-w
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