Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024
We report the detection of a Shigella sonnei outbreak from a small investigation in the San Francisco Bay area, California, USA, in 2024. By combining outbreak investigation with genomic sequencing, we show the utility of phylodynamics to aid outbreak investigations of bacterial pathogens by state...
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| Main Authors: | , , , , , , , , , , , |
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| Format: | Article |
| Language: | English |
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Centers for Disease Control and Prevention
2025-05-01
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| Series: | Emerging Infectious Diseases |
| Subjects: | |
| Online Access: | https://wwwnc.cdc.gov/eid/article/31/13/24-1307_article |
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| _version_ | 1849322079703269376 |
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| author | Tyler Lloyd Sana M. Khan Dustin Heaton Munira Shemsu Vici Varghese Jay Graham Misha Gregory Penny Dorfman Megan Talton Jessica DeVol Nicola F. Müller Kavita K. Trivedi |
| author_facet | Tyler Lloyd Sana M. Khan Dustin Heaton Munira Shemsu Vici Varghese Jay Graham Misha Gregory Penny Dorfman Megan Talton Jessica DeVol Nicola F. Müller Kavita K. Trivedi |
| author_sort | Tyler Lloyd |
| collection | DOAJ |
| description |
We report the detection of a Shigella sonnei outbreak from a small investigation in the San Francisco Bay area, California, USA, in 2024. By combining outbreak investigation with genomic sequencing, we show the utility of phylodynamics to aid outbreak investigations of bacterial pathogens by state or local public health departments.
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| format | Article |
| id | doaj-art-b4c2bebd33fd46edaa254221d81b6ed8 |
| institution | Kabale University |
| issn | 1080-6040 1080-6059 |
| language | English |
| publishDate | 2025-05-01 |
| publisher | Centers for Disease Control and Prevention |
| record_format | Article |
| series | Emerging Infectious Diseases |
| spelling | doaj-art-b4c2bebd33fd46edaa254221d81b6ed82025-08-20T03:49:32ZengCenters for Disease Control and PreventionEmerging Infectious Diseases1080-60401080-60592025-05-0131139810210.3201/eid3113.241307Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024Tyler LloydSana M. KhanDustin HeatonMunira ShemsuVici VargheseJay GrahamMisha GregoryPenny DorfmanMegan TaltonJessica DeVolNicola F. MüllerKavita K. Trivedi We report the detection of a Shigella sonnei outbreak from a small investigation in the San Francisco Bay area, California, USA, in 2024. By combining outbreak investigation with genomic sequencing, we show the utility of phylodynamics to aid outbreak investigations of bacterial pathogens by state or local public health departments. https://wwwnc.cdc.gov/eid/article/31/13/24-1307_articleShigella sonneibacteriaantimicrobial resistancemultidrug resistanceepidemiologyphylodynamic modelling |
| spellingShingle | Tyler Lloyd Sana M. Khan Dustin Heaton Munira Shemsu Vici Varghese Jay Graham Misha Gregory Penny Dorfman Megan Talton Jessica DeVol Nicola F. Müller Kavita K. Trivedi Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024 Emerging Infectious Diseases Shigella sonnei bacteria antimicrobial resistance multidrug resistance epidemiology phylodynamic modelling |
| title | Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024 |
| title_full | Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024 |
| title_fullStr | Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024 |
| title_full_unstemmed | Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024 |
| title_short | Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023–2024 |
| title_sort | genomic modeling of an outbreak of multidrug resistant shigella sonnei california usa 2023 2024 |
| topic | Shigella sonnei bacteria antimicrobial resistance multidrug resistance epidemiology phylodynamic modelling |
| url | https://wwwnc.cdc.gov/eid/article/31/13/24-1307_article |
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