Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae)
Quercus salicina Blume 1851, an evergreen broad-leaved species belonging to the family Fagaceae, is primarily distributed from southern Korea to Japan. In this study, we comprehensively analyzed the chloroplast genome of Q. salicina. Its genome, with a quadripartite structure, spanned 160,801 bp and...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2025-06-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2025.2503396 |
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| author | Soon-Ho Kwon Jin-Sung Huh Sik-Won Choi Su Jin Park Hyunmo Choi |
| author_facet | Soon-Ho Kwon Jin-Sung Huh Sik-Won Choi Su Jin Park Hyunmo Choi |
| author_sort | Soon-Ho Kwon |
| collection | DOAJ |
| description | Quercus salicina Blume 1851, an evergreen broad-leaved species belonging to the family Fagaceae, is primarily distributed from southern Korea to Japan. In this study, we comprehensively analyzed the chloroplast genome of Q. salicina. Its genome, with a quadripartite structure, spanned 160,801 bp and had a GC content of 36.58%. Annotation revealed 131 genes, including 86 protein-coding genes, eight rRNA genes, and 37 tRNA genes. These intricacies in the genome were further confirmed by the presence of introns in multiple genes. Phylogenetic analysis of 19 Fagales species elucidated their evolutionary relationships, with Fagus engleriana branching early and Q. salicina showing a close relationship with Q. gilva. This study enhances our understanding of the genetic makeup of Q. salicina and its evolutionary dynamics within the Fagales. |
| format | Article |
| id | doaj-art-b067b7346f8648d2a660befb75d97fdd |
| institution | OA Journals |
| issn | 2380-2359 |
| language | English |
| publishDate | 2025-06-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-b067b7346f8648d2a660befb75d97fdd2025-08-20T01:57:00ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592025-06-0110650450710.1080/23802359.2025.2503396Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae)Soon-Ho Kwon0Jin-Sung Huh1Sik-Won Choi2Su Jin Park3Hyunmo Choi4Forest Bioresources Department, National Institute of Forest Science, Suwon, Republic of KoreaForest Biomaterials Research Center, National Institute of Forest Science, Jinju, Republic of KoreaForest Biomaterials Research Center, National Institute of Forest Science, Jinju, Republic of KoreaForest Bioresources Department, National Institute of Forest Science, Suwon, Republic of KoreaForest Bioresources Department, National Institute of Forest Science, Suwon, Republic of KoreaQuercus salicina Blume 1851, an evergreen broad-leaved species belonging to the family Fagaceae, is primarily distributed from southern Korea to Japan. In this study, we comprehensively analyzed the chloroplast genome of Q. salicina. Its genome, with a quadripartite structure, spanned 160,801 bp and had a GC content of 36.58%. Annotation revealed 131 genes, including 86 protein-coding genes, eight rRNA genes, and 37 tRNA genes. These intricacies in the genome were further confirmed by the presence of introns in multiple genes. Phylogenetic analysis of 19 Fagales species elucidated their evolutionary relationships, with Fagus engleriana branching early and Q. salicina showing a close relationship with Q. gilva. This study enhances our understanding of the genetic makeup of Q. salicina and its evolutionary dynamics within the Fagales.https://www.tandfonline.com/doi/10.1080/23802359.2025.2503396Chloroplast genomeFagaceaeQuercus salicinaPhylogenetic analysis |
| spellingShingle | Soon-Ho Kwon Jin-Sung Huh Sik-Won Choi Su Jin Park Hyunmo Choi Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae) Mitochondrial DNA. Part B. Resources Chloroplast genome Fagaceae Quercus salicina Phylogenetic analysis |
| title | Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae) |
| title_full | Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae) |
| title_fullStr | Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae) |
| title_full_unstemmed | Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae) |
| title_short | Complete chloroplast genome sequence of Quercus salicina Blume (Fagaceae) |
| title_sort | complete chloroplast genome sequence of quercus salicina blume fagaceae |
| topic | Chloroplast genome Fagaceae Quercus salicina Phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2025.2503396 |
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