Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s disease

Despite the increasing incidence of Crohn’s disease (CD), its early immune disturbances have not all been described yet. We analysed single-cell RNASeq data from peripheral blood mononuclear cells of patients with incidentally-diagnosed CD, and compared their gene expression profile to healthy indiv...

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Main Authors: Dimitrios Kioroglou, Leire Egia-Mendikute, Asis Palazon, Manuel Barreiro-de Acosta, Iago Rodríguez-Lago, Urko M. Marigorta
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-05-01
Series:Frontiers in Immunology
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Online Access:https://www.frontiersin.org/articles/10.3389/fimmu.2025.1539830/full
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author Dimitrios Kioroglou
Leire Egia-Mendikute
Asis Palazon
Asis Palazon
Manuel Barreiro-de Acosta
Iago Rodríguez-Lago
Iago Rodríguez-Lago
Urko M. Marigorta
Urko M. Marigorta
author_facet Dimitrios Kioroglou
Leire Egia-Mendikute
Asis Palazon
Asis Palazon
Manuel Barreiro-de Acosta
Iago Rodríguez-Lago
Iago Rodríguez-Lago
Urko M. Marigorta
Urko M. Marigorta
author_sort Dimitrios Kioroglou
collection DOAJ
description Despite the increasing incidence of Crohn’s disease (CD), its early immune disturbances have not all been described yet. We analysed single-cell RNASeq data from peripheral blood mononuclear cells of patients with incidentally-diagnosed CD, and compared their gene expression profile to healthy individuals. The main aim of our study was to perform an exploratory analysis of how the subclinical inflammatory process is modifying the individual’s immunologic environment while the patient is still in the preclinical period.
format Article
id doaj-art-afb4fc33d86d4b2e9c286a099cdb7563
institution DOAJ
issn 1664-3224
language English
publishDate 2025-05-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Immunology
spelling doaj-art-afb4fc33d86d4b2e9c286a099cdb75632025-08-20T03:13:11ZengFrontiers Media S.A.Frontiers in Immunology1664-32242025-05-011610.3389/fimmu.2025.15398301539830Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s diseaseDimitrios Kioroglou0Leire Egia-Mendikute1Asis Palazon2Asis Palazon3Manuel Barreiro-de Acosta4Iago Rodríguez-Lago5Iago Rodríguez-Lago6Urko M. Marigorta7Urko M. Marigorta8Integrative Genomics Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, SpainCancer Immunology and Immunotherapy Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, SpainCancer Immunology and Immunotherapy Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, SpainIKERBASQUE, Basque Foundation for Sciences, Bilbao, SpainGastroenterology Department, Hospital Clínico Universitario de Santiago, Santiago de Compostela, SpainGastroenterology Department, Hospital Universitario de Galdakao, Biobizkaia Health Research Institute, Galdakao, SpainDepartment of Medicine, Faculty of Health Sciences, University of Deusto, Bilbao, SpainIntegrative Genomics Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, SpainIKERBASQUE, Basque Foundation for Sciences, Bilbao, SpainDespite the increasing incidence of Crohn’s disease (CD), its early immune disturbances have not all been described yet. We analysed single-cell RNASeq data from peripheral blood mononuclear cells of patients with incidentally-diagnosed CD, and compared their gene expression profile to healthy individuals. The main aim of our study was to perform an exploratory analysis of how the subclinical inflammatory process is modifying the individual’s immunologic environment while the patient is still in the preclinical period.https://www.frontiersin.org/articles/10.3389/fimmu.2025.1539830/fullCrohn’s diseasescRNAseqPBMCpreclinicalIBD
spellingShingle Dimitrios Kioroglou
Leire Egia-Mendikute
Asis Palazon
Asis Palazon
Manuel Barreiro-de Acosta
Iago Rodríguez-Lago
Iago Rodríguez-Lago
Urko M. Marigorta
Urko M. Marigorta
Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s disease
Frontiers in Immunology
Crohn’s disease
scRNAseq
PBMC
preclinical
IBD
title Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s disease
title_full Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s disease
title_fullStr Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s disease
title_full_unstemmed Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s disease
title_short Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn’s disease
title_sort single cell analysis reveals significant transcriptomic alterations in preclinical crohn s disease
topic Crohn’s disease
scRNAseq
PBMC
preclinical
IBD
url https://www.frontiersin.org/articles/10.3389/fimmu.2025.1539830/full
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