Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killing

Background Natural killer (NK) cells exhibit potent cytotoxic activity against various cancer cell types. Over the past five decades, numerous methodologies have been employed to elucidate the intricate molecular mechanisms underlying NK cell-mediated tumor control. While significant progress has be...

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Main Authors: Eric Vivier, Benjamin Rossi, Laurent Gauthier, Emilie Narni-Mancinelli, Justine Galluso, Sophie Guia, Aurore Fenis, Camille Baudesson De Chanville, Hakim Medjouel, Bertrand Escaliere, Angelika Modelska, Margaux Vienne, Noella Lopes, Amelie Pouchin, Sandrine Roulland
Format: Article
Language:English
Published: BMJ Publishing Group 2025-03-01
Series:Journal for ImmunoTherapy of Cancer
Online Access:https://jitc.bmj.com/content/13/3/e010699.full
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author Eric Vivier
Benjamin Rossi
Laurent Gauthier
Emilie Narni-Mancinelli
Justine Galluso
Sophie Guia
Aurore Fenis
Camille Baudesson De Chanville
Hakim Medjouel
Bertrand Escaliere
Angelika Modelska
Margaux Vienne
Noella Lopes
Amelie Pouchin
Sandrine Roulland
author_facet Eric Vivier
Benjamin Rossi
Laurent Gauthier
Emilie Narni-Mancinelli
Justine Galluso
Sophie Guia
Aurore Fenis
Camille Baudesson De Chanville
Hakim Medjouel
Bertrand Escaliere
Angelika Modelska
Margaux Vienne
Noella Lopes
Amelie Pouchin
Sandrine Roulland
author_sort Eric Vivier
collection DOAJ
description Background Natural killer (NK) cells exhibit potent cytotoxic activity against various cancer cell types. Over the past five decades, numerous methodologies have been employed to elucidate the intricate molecular mechanisms underlying NK cell-mediated tumor control. While significant progress has been made in elucidating the interactions between NK cells and tumor cells, the regulatory factors governing NK cell-mediated tumor cell destruction are not yet fully understood. This includes the diverse array of tumor ligands recognized by NK cells and the mechanisms that NK cells employ to eliminate tumor cells.Methods In this study, we employed a genome-wide CRISPR/Cas9 screening approach in conjunction with functional cytotoxicity assays to delineate the pathways modulating the susceptibility of colon adenocarcinoma HCT-116 cells to NK cell-mediated cytotoxicity.Results Analysis of guide RNA distribution in HCT-116 cells that survived co-incubation with NK cells identified ICAM-1 as a pivotal player in the NKp44-mediated immune synapse, with NKp44 serving as an activating receptor crucial for the elimination of HCT-116 tumor cells by NK cells. Furthermore, disruption of genes involved in the apoptosis or interferon (IFN)-γ signaling pathways conferred resistance to NK cell attack. We further dissected that NK cell-derived IFN-γ promotes mitochondrial apoptosis in vitro and exerts control over B16-F10 lung metastases in vivo.Conclusion Monitoring ICAM-1 levels on the surface of tumor cells or modulating its expression should be considered in the context of NK cell-based therapy. Furthermore, promoting FasL expression on the NK cell surface is reaffirmed as an important strategy to enhance NK cell-mediated tumor killing, offering an additional avenue for therapeutic optimization. Additionally, considering the diffusion properties of IFN-γ, our findings highlight the potential of leveraging NK cell-derived IFN-γ to enhance direct tumor cell killing and facilitate bystander effects via cytokine diffusion, warranting further investigation.
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spelling doaj-art-aedd6dc6dd75455381b9f38ab105a4492025-08-20T02:53:44ZengBMJ Publishing GroupJournal for ImmunoTherapy of Cancer2051-14262025-03-0113310.1136/jitc-2024-010699Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killingEric Vivier0Benjamin Rossi1Laurent Gauthier2Emilie Narni-Mancinelli3Justine Galluso4Sophie Guia5Aurore Fenis6Camille Baudesson De Chanville7Hakim Medjouel8Bertrand Escaliere9Angelika Modelska10Margaux Vienne11Noella Lopes12Amelie Pouchin13Sandrine Roulland14Aix-Marseille-University, Marseille, FranceInnate Pharma SA, Marseille, FranceInnate Pharma SA, Marseille, FranceCIML, Marseille, FranceInnate Pharma SA, Marseille, FranceCIML, Marseille, FranceCIML, Marseille, FranceCIML, Marseille, FranceCIML, Marseille, FranceCIML, Marseille, FranceCIML, Marseille, FranceU1104, INSERM, Marseille, FranceCIML, Marseille, FranceCIML, Marseille, FranceCIML, Marseille, FranceBackground Natural killer (NK) cells exhibit potent cytotoxic activity against various cancer cell types. Over the past five decades, numerous methodologies have been employed to elucidate the intricate molecular mechanisms underlying NK cell-mediated tumor control. While significant progress has been made in elucidating the interactions between NK cells and tumor cells, the regulatory factors governing NK cell-mediated tumor cell destruction are not yet fully understood. This includes the diverse array of tumor ligands recognized by NK cells and the mechanisms that NK cells employ to eliminate tumor cells.Methods In this study, we employed a genome-wide CRISPR/Cas9 screening approach in conjunction with functional cytotoxicity assays to delineate the pathways modulating the susceptibility of colon adenocarcinoma HCT-116 cells to NK cell-mediated cytotoxicity.Results Analysis of guide RNA distribution in HCT-116 cells that survived co-incubation with NK cells identified ICAM-1 as a pivotal player in the NKp44-mediated immune synapse, with NKp44 serving as an activating receptor crucial for the elimination of HCT-116 tumor cells by NK cells. Furthermore, disruption of genes involved in the apoptosis or interferon (IFN)-γ signaling pathways conferred resistance to NK cell attack. We further dissected that NK cell-derived IFN-γ promotes mitochondrial apoptosis in vitro and exerts control over B16-F10 lung metastases in vivo.Conclusion Monitoring ICAM-1 levels on the surface of tumor cells or modulating its expression should be considered in the context of NK cell-based therapy. Furthermore, promoting FasL expression on the NK cell surface is reaffirmed as an important strategy to enhance NK cell-mediated tumor killing, offering an additional avenue for therapeutic optimization. Additionally, considering the diffusion properties of IFN-γ, our findings highlight the potential of leveraging NK cell-derived IFN-γ to enhance direct tumor cell killing and facilitate bystander effects via cytokine diffusion, warranting further investigation.https://jitc.bmj.com/content/13/3/e010699.full
spellingShingle Eric Vivier
Benjamin Rossi
Laurent Gauthier
Emilie Narni-Mancinelli
Justine Galluso
Sophie Guia
Aurore Fenis
Camille Baudesson De Chanville
Hakim Medjouel
Bertrand Escaliere
Angelika Modelska
Margaux Vienne
Noella Lopes
Amelie Pouchin
Sandrine Roulland
Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killing
Journal for ImmunoTherapy of Cancer
title Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killing
title_full Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killing
title_fullStr Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killing
title_full_unstemmed Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killing
title_short Genome-wide CRISPR/Cas9 screen reveals factors that influence the susceptibility of tumor cells to NK cell-mediated killing
title_sort genome wide crispr cas9 screen reveals factors that influence the susceptibility of tumor cells to nk cell mediated killing
url https://jitc.bmj.com/content/13/3/e010699.full
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