Conditional Random Fields and Supervised Learning in Automated Skin Lesion Diagnosis

Many subproblems in automated skin lesion diagnosis (ASLD) can be unified under a single generalization of assigning a label, from an predefined set, to each pixel in an image. We first formalize this generalization and then present two probabilistic models capable of solving it. The first model is...

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Main Authors: Paul Wighton, Tim K. Lee, Greg Mori, Harvey Lui, David I. McLean, M. Stella Atkins
Format: Article
Language:English
Published: Wiley 2011-01-01
Series:International Journal of Biomedical Imaging
Online Access:http://dx.doi.org/10.1155/2011/846312
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author Paul Wighton
Tim K. Lee
Greg Mori
Harvey Lui
David I. McLean
M. Stella Atkins
author_facet Paul Wighton
Tim K. Lee
Greg Mori
Harvey Lui
David I. McLean
M. Stella Atkins
author_sort Paul Wighton
collection DOAJ
description Many subproblems in automated skin lesion diagnosis (ASLD) can be unified under a single generalization of assigning a label, from an predefined set, to each pixel in an image. We first formalize this generalization and then present two probabilistic models capable of solving it. The first model is based on independent pixel labeling using maximum a-posteriori (MAP) estimation. The second model is based on conditional random fields (CRFs), where dependencies between pixels are defined using a graph structure. Furthermore, we demonstrate how supervised learning and an appropriate training set can be used to automatically determine all model parameters. We evaluate both models' ability to segment a challenging dataset consisting of 116 images and compare our results to 5 previously published methods.
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institution Kabale University
issn 1687-4188
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language English
publishDate 2011-01-01
publisher Wiley
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series International Journal of Biomedical Imaging
spelling doaj-art-ad3325c2431947bf9372aa06730bb6552025-02-03T06:08:18ZengWileyInternational Journal of Biomedical Imaging1687-41881687-41962011-01-01201110.1155/2011/846312846312Conditional Random Fields and Supervised Learning in Automated Skin Lesion DiagnosisPaul Wighton0Tim K. Lee1Greg Mori2Harvey Lui3David I. McLean4M. Stella Atkins5Department of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, CanadaDepartment of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, CanadaDepartment of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, CanadaDepartment of Dermatology and Skin Science, Photomedicine Institute, University of British Columbia and Vancouver Coastal Health Research Institute, Vancouver, BC, V5Z 4E8, CanadaDepartment of Dermatology and Skin Science, Photomedicine Institute, University of British Columbia and Vancouver Coastal Health Research Institute, Vancouver, BC, V5Z 4E8, CanadaDepartment of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, CanadaMany subproblems in automated skin lesion diagnosis (ASLD) can be unified under a single generalization of assigning a label, from an predefined set, to each pixel in an image. We first formalize this generalization and then present two probabilistic models capable of solving it. The first model is based on independent pixel labeling using maximum a-posteriori (MAP) estimation. The second model is based on conditional random fields (CRFs), where dependencies between pixels are defined using a graph structure. Furthermore, we demonstrate how supervised learning and an appropriate training set can be used to automatically determine all model parameters. We evaluate both models' ability to segment a challenging dataset consisting of 116 images and compare our results to 5 previously published methods.http://dx.doi.org/10.1155/2011/846312
spellingShingle Paul Wighton
Tim K. Lee
Greg Mori
Harvey Lui
David I. McLean
M. Stella Atkins
Conditional Random Fields and Supervised Learning in Automated Skin Lesion Diagnosis
International Journal of Biomedical Imaging
title Conditional Random Fields and Supervised Learning in Automated Skin Lesion Diagnosis
title_full Conditional Random Fields and Supervised Learning in Automated Skin Lesion Diagnosis
title_fullStr Conditional Random Fields and Supervised Learning in Automated Skin Lesion Diagnosis
title_full_unstemmed Conditional Random Fields and Supervised Learning in Automated Skin Lesion Diagnosis
title_short Conditional Random Fields and Supervised Learning in Automated Skin Lesion Diagnosis
title_sort conditional random fields and supervised learning in automated skin lesion diagnosis
url http://dx.doi.org/10.1155/2011/846312
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