Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana

Abstract Background Plants have evolved multiple strategies to cope with the ever-changing external environment. Autophagy, as one of the crucial mechanisms involved, has been demonstrated to play a pivotal role in plant responses and adaptation to abiotic stresses. However, the precise molecular me...

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Main Authors: Yushi Peng, Shujuan Guo, Ben Lei, Linhui Yu, Qiuling Wang
Format: Article
Language:English
Published: BMC 2025-07-01
Series:BMC Plant Biology
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Online Access:https://doi.org/10.1186/s12870-025-07066-9
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author Yushi Peng
Shujuan Guo
Ben Lei
Linhui Yu
Qiuling Wang
author_facet Yushi Peng
Shujuan Guo
Ben Lei
Linhui Yu
Qiuling Wang
author_sort Yushi Peng
collection DOAJ
description Abstract Background Plants have evolved multiple strategies to cope with the ever-changing external environment. Autophagy, as one of the crucial mechanisms involved, has been demonstrated to play a pivotal role in plant responses and adaptation to abiotic stresses. However, the precise molecular mechanisms underlying the role of autophagy in mediating cold stress remain to be fully elucidated. Results In this study, we demonstrated that autophagy mutants presented increased freezing tolerance under both non-acclimated and cold-acclimated conditions in Arabidopsis. Autophagy positively regulates the expression of anthocyanin biosynthesis-related genes, thereby influencing anthocyanin accumulation in Arabidopsis under low-temperature conditions. Moreover, we found that cold stress directly suppresses the expression of autophagy-related genes and reduces autophagic flux in Arabidopsis. The RNA-seq data revealed that cold-responsive genes were pre-activated in the autophagy mutant atg13ab even before cold treatment. Additionally, we observed constitutive accumulation of the dehydrin protein COR47 in atg13ab mutant. Conclusions Taken together, these data suggest that autophagy is a negative regulator of freezing tolerance in Arabidopsis.
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spelling doaj-art-abe26d8f9b0d43c3bb3130af9503ea932025-08-20T03:04:24ZengBMCBMC Plant Biology1471-22292025-07-0125111810.1186/s12870-025-07066-9Autophagy deficiency confers freezing tolerance in Arabidopsis thalianaYushi Peng0Shujuan Guo1Ben Lei2Linhui Yu3Qiuling Wang4Institute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F UniversityInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F UniversityInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F UniversityInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F UniversityInstitute of Future Agriculture, State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F UniversityAbstract Background Plants have evolved multiple strategies to cope with the ever-changing external environment. Autophagy, as one of the crucial mechanisms involved, has been demonstrated to play a pivotal role in plant responses and adaptation to abiotic stresses. However, the precise molecular mechanisms underlying the role of autophagy in mediating cold stress remain to be fully elucidated. Results In this study, we demonstrated that autophagy mutants presented increased freezing tolerance under both non-acclimated and cold-acclimated conditions in Arabidopsis. Autophagy positively regulates the expression of anthocyanin biosynthesis-related genes, thereby influencing anthocyanin accumulation in Arabidopsis under low-temperature conditions. Moreover, we found that cold stress directly suppresses the expression of autophagy-related genes and reduces autophagic flux in Arabidopsis. The RNA-seq data revealed that cold-responsive genes were pre-activated in the autophagy mutant atg13ab even before cold treatment. Additionally, we observed constitutive accumulation of the dehydrin protein COR47 in atg13ab mutant. Conclusions Taken together, these data suggest that autophagy is a negative regulator of freezing tolerance in Arabidopsis.https://doi.org/10.1186/s12870-025-07066-9AutophagyArabidopsisCold stressatg13abATG8COR47
spellingShingle Yushi Peng
Shujuan Guo
Ben Lei
Linhui Yu
Qiuling Wang
Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana
BMC Plant Biology
Autophagy
Arabidopsis
Cold stress
atg13ab
ATG8
COR47
title Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana
title_full Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana
title_fullStr Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana
title_full_unstemmed Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana
title_short Autophagy deficiency confers freezing tolerance in Arabidopsis thaliana
title_sort autophagy deficiency confers freezing tolerance in arabidopsis thaliana
topic Autophagy
Arabidopsis
Cold stress
atg13ab
ATG8
COR47
url https://doi.org/10.1186/s12870-025-07066-9
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AT shujuanguo autophagydeficiencyconfersfreezingtoleranceinarabidopsisthaliana
AT benlei autophagydeficiencyconfersfreezingtoleranceinarabidopsisthaliana
AT linhuiyu autophagydeficiencyconfersfreezingtoleranceinarabidopsisthaliana
AT qiulingwang autophagydeficiencyconfersfreezingtoleranceinarabidopsisthaliana