Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura.

RNA-Seq is a powerful tool for the annotation of genomes, in particular for the identification of isoforms and UTRs. Nevertheless, several software tools exist and no standard strategy to obtain a reliable annotation is yet established. We tested different combinations of the most commonly used refe...

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Bibliographic Details
Main Authors: Nicola Palmieri, Viola Nolte, Anton Suvorov, Carolin Kosiol, Christian Schlötterer
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2012-01-01
Series:PLoS ONE
Online Access:https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0046415&type=printable
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