Integrated omics identifies molecular networks of brain-body interactions of brain injury

Summary: The molecular mechanisms of brain-body interactions in the progression of brain diseases remain unknown. Through integrative analysis of multi-organ proteomic, metabolomic, and transcriptomic data following ischemic stroke, we identified dynamic molecular signatures across organs. The heart...

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Main Authors: Yuan-Hong Deng, Hong Wang, Jia-Hang Zhang, Yu-Fei Wang, Meng-Yao Wang, Xin-Ru Pan, Yao-Dan Zhang, Yuan-Hui Gan, Yi He, Fang Xie, Xiao-Shuang Feng, Jia-Xin Xie, Bai-Tong Liu, Jiang-Tao Wang, Xin-Xiao Zhang, Peng-Fei Wang, Jie Li, Shu-Guang Yu, Qing-Wu Yang, Ming-Ze Bai, Yong Tang, Xiao-Yi Xiong
Format: Article
Language:English
Published: Elsevier 2025-08-01
Series:iScience
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Online Access:http://www.sciencedirect.com/science/article/pii/S2589004225013641
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author Yuan-Hong Deng
Hong Wang
Jia-Hang Zhang
Yu-Fei Wang
Meng-Yao Wang
Xin-Ru Pan
Yao-Dan Zhang
Yuan-Hui Gan
Yi He
Fang Xie
Xiao-Shuang Feng
Jia-Xin Xie
Bai-Tong Liu
Jiang-Tao Wang
Xin-Xiao Zhang
Peng-Fei Wang
Jie Li
Shu-Guang Yu
Qing-Wu Yang
Ming-Ze Bai
Yong Tang
Xiao-Yi Xiong
author_facet Yuan-Hong Deng
Hong Wang
Jia-Hang Zhang
Yu-Fei Wang
Meng-Yao Wang
Xin-Ru Pan
Yao-Dan Zhang
Yuan-Hui Gan
Yi He
Fang Xie
Xiao-Shuang Feng
Jia-Xin Xie
Bai-Tong Liu
Jiang-Tao Wang
Xin-Xiao Zhang
Peng-Fei Wang
Jie Li
Shu-Guang Yu
Qing-Wu Yang
Ming-Ze Bai
Yong Tang
Xiao-Yi Xiong
author_sort Yuan-Hong Deng
collection DOAJ
description Summary: The molecular mechanisms of brain-body interactions in the progression of brain diseases remain unknown. Through integrative analysis of multi-organ proteomic, metabolomic, and transcriptomic data following ischemic stroke, we identified dynamic molecular signatures across organs. The heart exhibited the highest number of differentially expressed proteins (DEPs), followed by spleen and intestine. Ten DEPs were shared among three organs post-stroke, with eight in heart, six in spleen, and five in intestine. Notably, organs displayed accelerated biological aging, particularly the intestine, ‌which is implicated in neurobehavioral regulation. Conjoint analysis further confirmed that DEPs originated from both intrinsic and immune cells that systemically infiltrated multiple organs. Finally, plasma DEPs showed high correlations with corresponding protein levels in distinct organs, potentially resulting in the systemic circulation of stroke. Our findings provide a comprehensive atlas of stroke-induced multi-organ molecular remodeling and establish a foundational framework for developing systemic therapeutic strategies targeting brain-body interactions in brain injury.
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issn 2589-0042
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publishDate 2025-08-01
publisher Elsevier
record_format Article
series iScience
spelling doaj-art-a44fcc6a13f5492c9b3805f67b04e1b82025-08-20T03:08:56ZengElsevieriScience2589-00422025-08-0128811310310.1016/j.isci.2025.113103Integrated omics identifies molecular networks of brain-body interactions of brain injuryYuan-Hong Deng0Hong Wang1Jia-Hang Zhang2Yu-Fei Wang3Meng-Yao Wang4Xin-Ru Pan5Yao-Dan Zhang6Yuan-Hui Gan7Yi He8Fang Xie9Xiao-Shuang Feng10Jia-Xin Xie11Bai-Tong Liu12Jiang-Tao Wang13Xin-Xiao Zhang14Peng-Fei Wang15Jie Li16Shu-Guang Yu17Qing-Wu Yang18Ming-Ze Bai19Yong Tang20Xiao-Yi Xiong21School of Health and Rehabilitation, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaChongqing Key Laboratory of Big Data for Bio Intelligence, Chongqing University of Posts and Telecommunications, 2 Chongwen Road, Chongqing 400065, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaSchool of Health and Rehabilitation, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, ChinaDepartment of Neurology, Weihai Municipal Hospital, Cheeloo College of Medicine, Shandong University, Weihai, ChinaDepartment of Neurology, Deyang People’s Hospital, Sichuan Clinical Research Center for Neurological Diseases, Chengdu University of Traditional Chinese Medicine, Deyang, ChinaAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, China; Acupuncture & Chronobiology Key Laboratory of Sichuan Province, Chengdu 610075, China; Key Laboratory of Acupuncture for Senile Disease (Chengdu University of TCM), Ministry of Education, Chengdu 610075, ChinaDepartment of Neurology, Xinqiao Hospital, the Army Medical University (Third Military Medical University), Chongqing, ChinaChongqing Key Laboratory of Big Data for Bio Intelligence, Chongqing University of Posts and Telecommunications, 2 Chongwen Road, Chongqing 400065, China; Corresponding authorSchool of Health and Rehabilitation, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, China; Acupuncture & Chronobiology Key Laboratory of Sichuan Province, Chengdu 610075, China; International Joint Research Centre on Purinergic Signalling, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China; Corresponding authorAcupuncture and Tuina School, Chengdu University of Traditional Chinese Medicine, 1166 Liutai Road, Chengdu 611137, China; Acupuncture & Chronobiology Key Laboratory of Sichuan Province, Chengdu 610075, China; Key Laboratory of Acupuncture for Senile Disease (Chengdu University of TCM), Ministry of Education, Chengdu 610075, China; Corresponding authorSummary: The molecular mechanisms of brain-body interactions in the progression of brain diseases remain unknown. Through integrative analysis of multi-organ proteomic, metabolomic, and transcriptomic data following ischemic stroke, we identified dynamic molecular signatures across organs. The heart exhibited the highest number of differentially expressed proteins (DEPs), followed by spleen and intestine. Ten DEPs were shared among three organs post-stroke, with eight in heart, six in spleen, and five in intestine. Notably, organs displayed accelerated biological aging, particularly the intestine, ‌which is implicated in neurobehavioral regulation. Conjoint analysis further confirmed that DEPs originated from both intrinsic and immune cells that systemically infiltrated multiple organs. Finally, plasma DEPs showed high correlations with corresponding protein levels in distinct organs, potentially resulting in the systemic circulation of stroke. Our findings provide a comprehensive atlas of stroke-induced multi-organ molecular remodeling and establish a foundational framework for developing systemic therapeutic strategies targeting brain-body interactions in brain injury.http://www.sciencedirect.com/science/article/pii/S2589004225013641neuroscienceimmunologyomics
spellingShingle Yuan-Hong Deng
Hong Wang
Jia-Hang Zhang
Yu-Fei Wang
Meng-Yao Wang
Xin-Ru Pan
Yao-Dan Zhang
Yuan-Hui Gan
Yi He
Fang Xie
Xiao-Shuang Feng
Jia-Xin Xie
Bai-Tong Liu
Jiang-Tao Wang
Xin-Xiao Zhang
Peng-Fei Wang
Jie Li
Shu-Guang Yu
Qing-Wu Yang
Ming-Ze Bai
Yong Tang
Xiao-Yi Xiong
Integrated omics identifies molecular networks of brain-body interactions of brain injury
iScience
neuroscience
immunology
omics
title Integrated omics identifies molecular networks of brain-body interactions of brain injury
title_full Integrated omics identifies molecular networks of brain-body interactions of brain injury
title_fullStr Integrated omics identifies molecular networks of brain-body interactions of brain injury
title_full_unstemmed Integrated omics identifies molecular networks of brain-body interactions of brain injury
title_short Integrated omics identifies molecular networks of brain-body interactions of brain injury
title_sort integrated omics identifies molecular networks of brain body interactions of brain injury
topic neuroscience
immunology
omics
url http://www.sciencedirect.com/science/article/pii/S2589004225013641
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