Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment options

Recent studies have deepened our understanding on gut microbiota alterations and the interaction with intestinal barrier impairments, which play a crucial role in the etiology and pathophysiology of Inflammatory bowel disease (IBD). The intestinal microbiota dysbiosis in IBD including the altered mi...

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Main Authors: Hongjun Xie, Siyan Yu, Mingyu Tang, Yating Xun, Qin Shen, Gaojue Wu
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-06-01
Series:Frontiers in Cellular and Infection Microbiology
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Online Access:https://www.frontiersin.org/articles/10.3389/fcimb.2025.1608025/full
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author Hongjun Xie
Hongjun Xie
Siyan Yu
Siyan Yu
Mingyu Tang
Mingyu Tang
Yating Xun
Yating Xun
Qin Shen
Qin Shen
Gaojue Wu
Gaojue Wu
Gaojue Wu
author_facet Hongjun Xie
Hongjun Xie
Siyan Yu
Siyan Yu
Mingyu Tang
Mingyu Tang
Yating Xun
Yating Xun
Qin Shen
Qin Shen
Gaojue Wu
Gaojue Wu
Gaojue Wu
author_sort Hongjun Xie
collection DOAJ
description Recent studies have deepened our understanding on gut microbiota alterations and the interaction with intestinal barrier impairments, which play a crucial role in the etiology and pathophysiology of Inflammatory bowel disease (IBD). The intestinal microbiota dysbiosis in IBD including the altered microbiota composition, decreased beneficial species and increased harmful species. The disturbed gut microbiota results in the aggravation of intestinal barrier dysfunction through regulation of antimicrobial substances in mucus layer, tight junction protein in mechanical layer and inflammatory response in immune layer. The therapeutic options targeted on the microbiota including antibiotics, probiotics and fecal microbiota transplantation (FMT) exhibit efficacies and limitations in the treatment of IBD. Reasonable single or combined use of these treatments can restore intestinal microecological homeostasis, which further contributes to the treatment of IBD. This review analyzes the underlying mechanisms for the interaction between microbiota alterations and gut barrier dysfunction in IBD; meanwhile, it provides new insights into the microbiota-targeted therapeutic options IBD, including the benefits, risks and limitations of antibiotic and probiotic therapies, unresolved clinical application strategies for FMT, and combination administrations of antibiotics and FMT.
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institution Kabale University
issn 2235-2988
language English
publishDate 2025-06-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Cellular and Infection Microbiology
spelling doaj-art-a3e01a7011824ee3aaf4ddb9be5724f82025-08-20T03:24:06ZengFrontiers Media S.A.Frontiers in Cellular and Infection Microbiology2235-29882025-06-011510.3389/fcimb.2025.16080251608025Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment optionsHongjun Xie0Hongjun Xie1Siyan Yu2Siyan Yu3Mingyu Tang4Mingyu Tang5Yating Xun6Yating Xun7Qin Shen8Qin Shen9Gaojue Wu10Gaojue Wu11Gaojue Wu12Department of Gastroenterology, Wuxi No. 2 People’s Hospital, Affiliated Wuxi Clinical College of Nantong University, Wuxi, Jiangsu, ChinaSchool of Medicine, Nantong University, Nantong, Jiangsu, ChinaSchool of Medicine, Nantong University, Nantong, Jiangsu, ChinaWuxi School of Medicine, Jiangnan University, Wuxi, Jiangsu, ChinaSchool of Medicine, Nantong University, Nantong, Jiangsu, ChinaWuxi School of Medicine, Jiangnan University, Wuxi, Jiangsu, ChinaDepartment of Gastroenterology, Wuxi No. 2 People’s Hospital, Affiliated Wuxi Clinical College of Nantong University, Wuxi, Jiangsu, ChinaSchool of Medicine, Nantong University, Nantong, Jiangsu, ChinaSchool of Medicine, Nantong University, Nantong, Jiangsu, ChinaWuxi School of Medicine, Jiangnan University, Wuxi, Jiangsu, ChinaDepartment of Gastroenterology, Wuxi No. 2 People’s Hospital, Affiliated Wuxi Clinical College of Nantong University, Wuxi, Jiangsu, ChinaSchool of Medicine, Nantong University, Nantong, Jiangsu, ChinaWuxi School of Medicine, Jiangnan University, Wuxi, Jiangsu, ChinaRecent studies have deepened our understanding on gut microbiota alterations and the interaction with intestinal barrier impairments, which play a crucial role in the etiology and pathophysiology of Inflammatory bowel disease (IBD). The intestinal microbiota dysbiosis in IBD including the altered microbiota composition, decreased beneficial species and increased harmful species. The disturbed gut microbiota results in the aggravation of intestinal barrier dysfunction through regulation of antimicrobial substances in mucus layer, tight junction protein in mechanical layer and inflammatory response in immune layer. The therapeutic options targeted on the microbiota including antibiotics, probiotics and fecal microbiota transplantation (FMT) exhibit efficacies and limitations in the treatment of IBD. Reasonable single or combined use of these treatments can restore intestinal microecological homeostasis, which further contributes to the treatment of IBD. This review analyzes the underlying mechanisms for the interaction between microbiota alterations and gut barrier dysfunction in IBD; meanwhile, it provides new insights into the microbiota-targeted therapeutic options IBD, including the benefits, risks and limitations of antibiotic and probiotic therapies, unresolved clinical application strategies for FMT, and combination administrations of antibiotics and FMT.https://www.frontiersin.org/articles/10.3389/fcimb.2025.1608025/fullinflammatory bowel diseasegut microbiotaintestinal barrierfecal microbiota transplantationantibioticsprobiotics
spellingShingle Hongjun Xie
Hongjun Xie
Siyan Yu
Siyan Yu
Mingyu Tang
Mingyu Tang
Yating Xun
Yating Xun
Qin Shen
Qin Shen
Gaojue Wu
Gaojue Wu
Gaojue Wu
Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment options
Frontiers in Cellular and Infection Microbiology
inflammatory bowel disease
gut microbiota
intestinal barrier
fecal microbiota transplantation
antibiotics
probiotics
title Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment options
title_full Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment options
title_fullStr Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment options
title_full_unstemmed Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment options
title_short Gut microbiota dysbiosis in inflammatory bowel disease: interaction with intestinal barriers and microbiota-targeted treatment options
title_sort gut microbiota dysbiosis in inflammatory bowel disease interaction with intestinal barriers and microbiota targeted treatment options
topic inflammatory bowel disease
gut microbiota
intestinal barrier
fecal microbiota transplantation
antibiotics
probiotics
url https://www.frontiersin.org/articles/10.3389/fcimb.2025.1608025/full
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