SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing

Abstract Cryptosporidium is a major cause of severe diarrhea. Although Cryptosporidium isolates exhibit significant differences in infectivity and virulence, the genetic determinants for these traits are not clear. In this study, we use classical genetics to cross two Cryptosporidium parvum isolates...

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Main Authors: Wei He, Lianbei Sun, Tianyi Hou, Zuwei Yang, Fuxian Yang, Shengchen Zhang, Tianpeng Wang, Xinran Wang, Na Li, Yaqiong Guo, L. David Sibley, Yaoyu Feng, Lihua Xiao
Format: Article
Language:English
Published: Nature Portfolio 2025-05-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-60088-7
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author Wei He
Lianbei Sun
Tianyi Hou
Zuwei Yang
Fuxian Yang
Shengchen Zhang
Tianpeng Wang
Xinran Wang
Na Li
Yaqiong Guo
L. David Sibley
Yaoyu Feng
Lihua Xiao
author_facet Wei He
Lianbei Sun
Tianyi Hou
Zuwei Yang
Fuxian Yang
Shengchen Zhang
Tianpeng Wang
Xinran Wang
Na Li
Yaqiong Guo
L. David Sibley
Yaoyu Feng
Lihua Xiao
author_sort Wei He
collection DOAJ
description Abstract Cryptosporidium is a major cause of severe diarrhea. Although Cryptosporidium isolates exhibit significant differences in infectivity and virulence, the genetic determinants for these traits are not clear. In this study, we use classical genetics to cross two Cryptosporidium parvum isolates of different virulence and use bulk segregant analysis of whole-genome sequences from the progeny to identify quantitative trait loci (QTL) associated with Cryptosporidium infectivity and virulence. Of the 23 genes in three QTL, two have loss-of-function mutations in the low-virulence isolates, including the SKSR1 gene encoding a variant secretory protein. Deletion of the SKSR1 gene or expression of the frame-shifted sequence reduces the pathogenicity of the virulent isolate. SKSR1 is expressed in small granules and secreted into the parasite-host interface during invasion. These results demonstrate that SKSR1 is an important virulence factor in Cryptosporidium, and suggest that the extended SKSR protein family, encoded by clusters of subtelomeric genes, may contribute to pathogenesis.
format Article
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institution Kabale University
issn 2041-1723
language English
publishDate 2025-05-01
publisher Nature Portfolio
record_format Article
series Nature Communications
spelling doaj-art-a2ead7210287457cbca5e8eca34b632c2025-08-20T03:48:18ZengNature PortfolioNature Communications2041-17232025-05-0116111510.1038/s41467-025-60088-7SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossingWei He0Lianbei Sun1Tianyi Hou2Zuwei Yang3Fuxian Yang4Shengchen Zhang5Tianpeng Wang6Xinran Wang7Na Li8Yaqiong Guo9L. David Sibley10Yaoyu Feng11Lihua Xiao12State Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityDepartment of Molecular Microbiology, Washington University School of MedicineState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityState Key Laboratory for Animal Disease Control and Prevention, Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural UniversityAbstract Cryptosporidium is a major cause of severe diarrhea. Although Cryptosporidium isolates exhibit significant differences in infectivity and virulence, the genetic determinants for these traits are not clear. In this study, we use classical genetics to cross two Cryptosporidium parvum isolates of different virulence and use bulk segregant analysis of whole-genome sequences from the progeny to identify quantitative trait loci (QTL) associated with Cryptosporidium infectivity and virulence. Of the 23 genes in three QTL, two have loss-of-function mutations in the low-virulence isolates, including the SKSR1 gene encoding a variant secretory protein. Deletion of the SKSR1 gene or expression of the frame-shifted sequence reduces the pathogenicity of the virulent isolate. SKSR1 is expressed in small granules and secreted into the parasite-host interface during invasion. These results demonstrate that SKSR1 is an important virulence factor in Cryptosporidium, and suggest that the extended SKSR protein family, encoded by clusters of subtelomeric genes, may contribute to pathogenesis.https://doi.org/10.1038/s41467-025-60088-7
spellingShingle Wei He
Lianbei Sun
Tianyi Hou
Zuwei Yang
Fuxian Yang
Shengchen Zhang
Tianpeng Wang
Xinran Wang
Na Li
Yaqiong Guo
L. David Sibley
Yaoyu Feng
Lihua Xiao
SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing
Nature Communications
title SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing
title_full SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing
title_fullStr SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing
title_full_unstemmed SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing
title_short SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing
title_sort sksr1 identified as key virulence factor in cryptosporidium by genetic crossing
url https://doi.org/10.1038/s41467-025-60088-7
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