Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implications
Hynobius bambusicolus (Caudata, Hynobiidae) is a recently described species, identified in 2022, and is thus not widely known. In this study, we sequenced and annotated the complete mitogenome of H. bambusicolus. The resulting mitochondrial genome is 16,406 bp in length and comprises 13 protein-codi...
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Taylor & Francis Group
2025-04-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2025.2475845 |
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| author | Yanpin Huang Helin Wang Haoran Luo Honghui Zhong Qingxian Lin Xiaoping Zhou |
| author_facet | Yanpin Huang Helin Wang Haoran Luo Honghui Zhong Qingxian Lin Xiaoping Zhou |
| author_sort | Yanpin Huang |
| collection | DOAJ |
| description | Hynobius bambusicolus (Caudata, Hynobiidae) is a recently described species, identified in 2022, and is thus not widely known. In this study, we sequenced and annotated the complete mitogenome of H. bambusicolus. The resulting mitochondrial genome is 16,406 bp in length and comprises 13 protein-coding genes (PCGs), two ribosomal RNA genes (rRNA), 22 transfer RNA genes, and a non-coding region. The base composition of the mitogenome is 33.3% A, 32.1% T, 20.8% C, and 13.8% G. The phylogenetic trees indicated that H. bambusicolus is the basal branch within the Southern Chinese Hynobius clade. |
| format | Article |
| id | doaj-art-9dabdbd710e448ee92e67d703536f0ea |
| institution | OA Journals |
| issn | 2380-2359 |
| language | English |
| publishDate | 2025-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-9dabdbd710e448ee92e67d703536f0ea2025-08-20T02:34:29ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592025-04-0110427828210.1080/23802359.2025.2475845Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implicationsYanpin Huang0Helin Wang1Haoran Luo2Honghui Zhong3Qingxian Lin4Xiaoping Zhou5Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University, Xiamen, ChinaKey Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University, Xiamen, ChinaKey Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University, Xiamen, ChinaMeihua Mountain National Nature Reserve Administration, Longyan, ChinaKey Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University, Xiamen, ChinaKey Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University, Xiamen, ChinaHynobius bambusicolus (Caudata, Hynobiidae) is a recently described species, identified in 2022, and is thus not widely known. In this study, we sequenced and annotated the complete mitogenome of H. bambusicolus. The resulting mitochondrial genome is 16,406 bp in length and comprises 13 protein-coding genes (PCGs), two ribosomal RNA genes (rRNA), 22 transfer RNA genes, and a non-coding region. The base composition of the mitogenome is 33.3% A, 32.1% T, 20.8% C, and 13.8% G. The phylogenetic trees indicated that H. bambusicolus is the basal branch within the Southern Chinese Hynobius clade.https://www.tandfonline.com/doi/10.1080/23802359.2025.2475845Caudatahynobidaemitochondrial genomehigh-throughput sequencingphylogenetic analysis |
| spellingShingle | Yanpin Huang Helin Wang Haoran Luo Honghui Zhong Qingxian Lin Xiaoping Zhou Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implications Mitochondrial DNA. Part B. Resources Caudata hynobidae mitochondrial genome high-throughput sequencing phylogenetic analysis |
| title | Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implications |
| title_full | Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implications |
| title_fullStr | Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implications |
| title_full_unstemmed | Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implications |
| title_short | Characterization of the complete mitochondrial genome of Hynobius bambusicolus Wang, Othman, Qiu and Borzée, 2023 (Amphibia, Caudata, Hynobiidae) and its phylogenetic implications |
| title_sort | characterization of the complete mitochondrial genome of hynobius bambusicolus wang othman qiu and borzee 2023 amphibia caudata hynobiidae and its phylogenetic implications |
| topic | Caudata hynobidae mitochondrial genome high-throughput sequencing phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2025.2475845 |
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