Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human Consumption

This study investigated the seasonal and spatial dynamics of off-flavour compounds—geosmin and 2-methylisoborneol (2-MIB)—in an intensive rainbow trout (<i>Oncorhynchus mykiss</i>) aquaculture system for human consumption in western Spain. Weekly water and fish flesh samples were collect...

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Main Authors: Juan José Córdoba-Granados, Almudena V. Merchán, Carlos Moraga, Paula Tejero, Alberto Martín, María José Benito
Format: Article
Language:English
Published: MDPI AG 2025-07-01
Series:Foods
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Online Access:https://www.mdpi.com/2304-8158/14/14/2517
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author Juan José Córdoba-Granados
Almudena V. Merchán
Carlos Moraga
Paula Tejero
Alberto Martín
María José Benito
author_facet Juan José Córdoba-Granados
Almudena V. Merchán
Carlos Moraga
Paula Tejero
Alberto Martín
María José Benito
author_sort Juan José Córdoba-Granados
collection DOAJ
description This study investigated the seasonal and spatial dynamics of off-flavour compounds—geosmin and 2-methylisoborneol (2-MIB)—in an intensive rainbow trout (<i>Oncorhynchus mykiss</i>) aquaculture system for human consumption in western Spain. Weekly water and fish flesh samples were collected over a 12-month period from three farms supplied by the River Tormes. Physicochemical parameters, determination of geosmin and 2-MIB by SPME-GC-MS, microbial counts, and microbial community composition were assessed alongside volatile compound concentrations. Geosmin and 2-MIB showed marked seasonal variation, with peak levels in water and fish flesh during spring and summer, correlating positively with temperature. Geosmin accumulation in fish was highest in the downstream farm, suggesting cumulative exposure effects. In contrast, 2-MIB was detected only in water and at lower concentrations. Microbial analyses revealed high bacterial and fungal diversity, including cyanobacterial taxa such as <i>Phormidium setchellianum</i> and <i>Pseudoanabaena minima</i>, known producers of geosmin and 2-MIB. These findings highlight the importance of water microbiota and environmental conditions in off-flavour development. Managing cyanobacterial populations and monitoring spatial-temporal variability are essential to mitigate the development of earthy or musty flavours and economic losses in aquaculture systems.
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institution Kabale University
issn 2304-8158
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publishDate 2025-07-01
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spelling doaj-art-9d4f8d9f221443279d040f9b03bc24852025-08-20T03:36:11ZengMDPI AGFoods2304-81582025-07-011414251710.3390/foods14142517Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human ConsumptionJuan José Córdoba-Granados0Almudena V. Merchán1Carlos Moraga2Paula Tejero3Alberto Martín4María José Benito5Carretera Cañada de la Loba (CA-3102) PK 3, Apdo. Correos, 589, 11590 Jerez de la Frontera, Cádiz, SpainNutrición y Bromatología, Escuela de Ingenierías Agrarias, Universidad de Extremadura, Avd. Adolfo Suárez s/n, 06007 Badajoz, SpainCentro de Investigaciones Científicas de Extremadura (CICYTEX), Crta. A-V, Km 372, 06187 Guadajira, Badajoz, SpainNutrición y Bromatología, Escuela de Ingenierías Agrarias, Universidad de Extremadura, Avd. Adolfo Suárez s/n, 06007 Badajoz, SpainNutrición y Bromatología, Escuela de Ingenierías Agrarias, Universidad de Extremadura, Avd. Adolfo Suárez s/n, 06007 Badajoz, SpainNutrición y Bromatología, Escuela de Ingenierías Agrarias, Universidad de Extremadura, Avd. Adolfo Suárez s/n, 06007 Badajoz, SpainThis study investigated the seasonal and spatial dynamics of off-flavour compounds—geosmin and 2-methylisoborneol (2-MIB)—in an intensive rainbow trout (<i>Oncorhynchus mykiss</i>) aquaculture system for human consumption in western Spain. Weekly water and fish flesh samples were collected over a 12-month period from three farms supplied by the River Tormes. Physicochemical parameters, determination of geosmin and 2-MIB by SPME-GC-MS, microbial counts, and microbial community composition were assessed alongside volatile compound concentrations. Geosmin and 2-MIB showed marked seasonal variation, with peak levels in water and fish flesh during spring and summer, correlating positively with temperature. Geosmin accumulation in fish was highest in the downstream farm, suggesting cumulative exposure effects. In contrast, 2-MIB was detected only in water and at lower concentrations. Microbial analyses revealed high bacterial and fungal diversity, including cyanobacterial taxa such as <i>Phormidium setchellianum</i> and <i>Pseudoanabaena minima</i>, known producers of geosmin and 2-MIB. These findings highlight the importance of water microbiota and environmental conditions in off-flavour development. Managing cyanobacterial populations and monitoring spatial-temporal variability are essential to mitigate the development of earthy or musty flavours and economic losses in aquaculture systems.https://www.mdpi.com/2304-8158/14/14/2517geosmin2-MIBtemperatureoff-flavoursrainbow troutaquaculture system
spellingShingle Juan José Córdoba-Granados
Almudena V. Merchán
Carlos Moraga
Paula Tejero
Alberto Martín
María José Benito
Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human Consumption
Foods
geosmin
2-MIB
temperature
off-flavours
rainbow trout
aquaculture system
title Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human Consumption
title_full Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human Consumption
title_fullStr Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human Consumption
title_full_unstemmed Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human Consumption
title_short Determination of Geosmin and 2-Methylisoborneol and Associated Microbial Composition in Rainbow Trout Aquaculture Systems for Human Consumption
title_sort determination of geosmin and 2 methylisoborneol and associated microbial composition in rainbow trout aquaculture systems for human consumption
topic geosmin
2-MIB
temperature
off-flavours
rainbow trout
aquaculture system
url https://www.mdpi.com/2304-8158/14/14/2517
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