Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)

Tomato yellow leaf curl virus (TYLCV), tomato leaf curl New Delhi virus (ToLCNDV), and tomato chlorosis virus (ToCV) are emerging viruses that cause significant damage to tomato (<i>Solanum lycopersicum</i>). TYLCV and ToLCNDV are single-stranded DNA viruses from the genus <i>Begom...

Full description

Saved in:
Bibliographic Details
Main Authors: Isabel M. Fortes, Luis Díaz-Martínez, Enrique Moriones, Ana Grande-Pérez
Format: Article
Language:English
Published: MDPI AG 2025-04-01
Series:Agronomy
Subjects:
Online Access:https://www.mdpi.com/2073-4395/15/5/1006
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1850255051753259008
author Isabel M. Fortes
Luis Díaz-Martínez
Enrique Moriones
Ana Grande-Pérez
author_facet Isabel M. Fortes
Luis Díaz-Martínez
Enrique Moriones
Ana Grande-Pérez
author_sort Isabel M. Fortes
collection DOAJ
description Tomato yellow leaf curl virus (TYLCV), tomato leaf curl New Delhi virus (ToLCNDV), and tomato chlorosis virus (ToCV) are emerging viruses that cause significant damage to tomato (<i>Solanum lycopersicum</i>). TYLCV and ToLCNDV are single-stranded DNA viruses from the genus <i>Begomovirus</i>, family <i>Geminiviridae</i>, while ToCV is an RNA virus from the genus <i>Crinivirus</i> (family <i>Closteroviridae).</i> These viruses share overlapping geographic ranges, vectors (the whitefly <i>Bemisia tabaci</i>), and host plants, making mixed infections common. This study investigated interactions between TYLCV and ToLCNDV and between ToLCNDV and ToCV in mixed infections of susceptible and TYLCV-resistant tomato genotypes. We evaluated infection, disease development, trans-replication of genome components, and genetic exchange. Our results showed no significant synergistic or antagonistic interactions, complementation, or interference between the viruses. TYLCV resistance in tomato genotypes remained stable. The DNA-B component of ToLCNDV exhibited impaired functionality and was not complemented by TYLCV. No evidence was found that the crinivirus tomato chlorosis virus (ToCV) enhances ToLCNDV infection, suggesting limited interactions despite shared vectors. Genetic exchange was detected in defective DNA (def-DNA) molecules using high-throughput sequencing (HTS), indicating potential genetic interactions between these viruses. These findings suggest that mixed infections do not pose immediate concerns for increased pathogenicity but highlight the ecological implications of genetic exchange, warranting further study of the evolutionary consequences of such interactions in mixed-virus environments.
format Article
id doaj-art-9d3450e527a248d39faaa310482fe92b
institution OA Journals
issn 2073-4395
language English
publishDate 2025-04-01
publisher MDPI AG
record_format Article
series Agronomy
spelling doaj-art-9d3450e527a248d39faaa310482fe92b2025-08-20T01:56:57ZengMDPI AGAgronomy2073-43952025-04-01155100610.3390/agronomy15051006Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)Isabel M. Fortes0Luis Díaz-Martínez1Enrique Moriones2Ana Grande-Pérez3Estación Experimental “La Mayora”, Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora” (IHSM), Universidad de Málaga-Consejo Superior de Investigaciones Científicas, 29750 Algarrobo-Costa, Malaga, SpainCentro de Supercomputación y Bioinnovación (SCBI), Universidad de Málaga, 29590 Malaga, SpainEstación Experimental “La Mayora”, Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora” (IHSM), Universidad de Málaga-Consejo Superior de Investigaciones Científicas, 29750 Algarrobo-Costa, Malaga, SpainÁrea de Genética, Facultad de Ciencias, Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora” (IHSM), Universidad de Málaga-Consejo Superior de Investigaciones Científicas, 29010 Malaga, SpainTomato yellow leaf curl virus (TYLCV), tomato leaf curl New Delhi virus (ToLCNDV), and tomato chlorosis virus (ToCV) are emerging viruses that cause significant damage to tomato (<i>Solanum lycopersicum</i>). TYLCV and ToLCNDV are single-stranded DNA viruses from the genus <i>Begomovirus</i>, family <i>Geminiviridae</i>, while ToCV is an RNA virus from the genus <i>Crinivirus</i> (family <i>Closteroviridae).</i> These viruses share overlapping geographic ranges, vectors (the whitefly <i>Bemisia tabaci</i>), and host plants, making mixed infections common. This study investigated interactions between TYLCV and ToLCNDV and between ToLCNDV and ToCV in mixed infections of susceptible and TYLCV-resistant tomato genotypes. We evaluated infection, disease development, trans-replication of genome components, and genetic exchange. Our results showed no significant synergistic or antagonistic interactions, complementation, or interference between the viruses. TYLCV resistance in tomato genotypes remained stable. The DNA-B component of ToLCNDV exhibited impaired functionality and was not complemented by TYLCV. No evidence was found that the crinivirus tomato chlorosis virus (ToCV) enhances ToLCNDV infection, suggesting limited interactions despite shared vectors. Genetic exchange was detected in defective DNA (def-DNA) molecules using high-throughput sequencing (HTS), indicating potential genetic interactions between these viruses. These findings suggest that mixed infections do not pose immediate concerns for increased pathogenicity but highlight the ecological implications of genetic exchange, warranting further study of the evolutionary consequences of such interactions in mixed-virus environments.https://www.mdpi.com/2073-4395/15/5/1006begomovirusdefective DNA (def-DNA)geminivirusgenetic exchangemixed infectionsrecombination
spellingShingle Isabel M. Fortes
Luis Díaz-Martínez
Enrique Moriones
Ana Grande-Pérez
Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)
Agronomy
begomovirus
defective DNA (def-DNA)
geminivirus
genetic exchange
mixed infections
recombination
title Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)
title_full Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)
title_fullStr Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)
title_full_unstemmed Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)
title_short Virus–Host Interactions and Genetic Exchange in Mixed Infections of Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Leaf Curl New Delhi Virus (ToLCNDV), and Tomato Chlorosis Virus (ToCV)
title_sort virus host interactions and genetic exchange in mixed infections of tomato yellow leaf curl virus tylcv tomato leaf curl new delhi virus tolcndv and tomato chlorosis virus tocv
topic begomovirus
defective DNA (def-DNA)
geminivirus
genetic exchange
mixed infections
recombination
url https://www.mdpi.com/2073-4395/15/5/1006
work_keys_str_mv AT isabelmfortes virushostinteractionsandgeneticexchangeinmixedinfectionsoftomatoyellowleafcurlvirustylcvtomatoleafcurlnewdelhivirustolcndvandtomatochlorosisvirustocv
AT luisdiazmartinez virushostinteractionsandgeneticexchangeinmixedinfectionsoftomatoyellowleafcurlvirustylcvtomatoleafcurlnewdelhivirustolcndvandtomatochlorosisvirustocv
AT enriquemoriones virushostinteractionsandgeneticexchangeinmixedinfectionsoftomatoyellowleafcurlvirustylcvtomatoleafcurlnewdelhivirustolcndvandtomatochlorosisvirustocv
AT anagrandeperez virushostinteractionsandgeneticexchangeinmixedinfectionsoftomatoyellowleafcurlvirustylcvtomatoleafcurlnewdelhivirustolcndvandtomatochlorosisvirustocv