The complete mitogenome of an unidentified Oikopleura species [version 3; peer review: 2 approved, 2 approved with reservations]

Appendicularians are planktonic tunicates abundant all over the world. Currently, only two complete annotated mitochondrial genome assemblies are available for appendicularians, both for cryptic species of Oikopleura dioica. This underrepresentation of available appendicularian mitochondrial genomes...

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Main Authors: Nicholas M. Luscombe, Aki Masunaga, Jiashun Miao, Nicolas Dierckxsens, Johannes Nicolaus Wibisana, Charles Plessy
Format: Article
Language:English
Published: F1000 Research Ltd 2025-05-01
Series:F1000Research
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Online Access:https://f1000research.com/articles/13-1357/v3
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Summary:Appendicularians are planktonic tunicates abundant all over the world. Currently, only two complete annotated mitochondrial genome assemblies are available for appendicularians, both for cryptic species of Oikopleura dioica. This underrepresentation of available appendicularian mitochondrial genomes limits environmental DNA sequencing (eDNA) studies that rely on mitochondrial markers as a taxonomic barcode. We report the complete mitochondrial genome assembly and annotation of an unknown appendicularian species isolated from the Amami Oshima island, Kagoshima prefecture, Japan, that has significant sequence difference with other currently available assemblies and will serve as a useful resource for ecological studies and further mitochondrial studies of appendicularians.
ISSN:2046-1402