A Barcoded ITS Primer-Based Nanopore Sequencing Protocol for Detection of <i>Alternaria</i> Species and Other Fungal Pathogens in Diverse Plant Hosts

A Barcoded ITS Primer-Based Nanopore Sequencing Protocol for Detection of <i>Alternaria</i> Species and Other Fungal Pathogens in Diverse Plant Hosts

<i>Alternaria</i> is a genus that contains several important plant pathogens affecting nearly 400 plant species worldwide, including economically important crops such as grapes, citrus, and ornamental plants. Rapid, scalable, and efficient methods of pathogen detection are crucial for ma...

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Bibliographic Details
Main Authors: Vladimer Baramidze, Luca Sella, Tamar Japaridze, Nino Dzotsenidze, Daviti Lamazoshvili, Nino Abashidze, Maka Basilidze, Giorgi Tomashvili
Format: Article
Language:English
Published: MDPI AG 2025-03-01
Series:Journal of Fungi
Subjects:
<i>Alternaria</i> spp.
barcoded ITS primers
nanopore sequencing
plant pathogen
mycobiome
Online Access:https://www.mdpi.com/2309-608X/11/4/249
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