MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compounds

Abstract Methoxylated aromatic compounds, are abundant in subsurface ecosystems. Recently, it was discovered that Methermicoccus shengliensis can convert methoxylated aromatics to methane. Specifically, the MATE family transporters (MatE) and transduction-like protein (Tlp) were hypothesized to play...

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Main Authors: Huan Leng, Dong Wang, Qing Yang, Shuxin Wang, Leizhou Guo, Pengyan Zhao, Yi Chen, Lirong Dai, Guihong Cha, Liping Bai, Frank Delvigne
Format: Article
Language:English
Published: Nature Portfolio 2025-02-01
Series:Communications Biology
Online Access:https://doi.org/10.1038/s42003-025-07583-1
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author Huan Leng
Dong Wang
Qing Yang
Shuxin Wang
Leizhou Guo
Pengyan Zhao
Yi Chen
Lirong Dai
Guihong Cha
Liping Bai
Frank Delvigne
author_facet Huan Leng
Dong Wang
Qing Yang
Shuxin Wang
Leizhou Guo
Pengyan Zhao
Yi Chen
Lirong Dai
Guihong Cha
Liping Bai
Frank Delvigne
author_sort Huan Leng
collection DOAJ
description Abstract Methoxylated aromatic compounds, are abundant in subsurface ecosystems. Recently, it was discovered that Methermicoccus shengliensis can convert methoxylated aromatics to methane. Specifically, the MATE family transporters (MatE) and transduction-like protein (Tlp) were hypothesized to play a crucial role in substrate transport. However, their biological function and the transporting model remained unclear. To address this knowledge gap, we employed bacterial two-hybrid and structural model assays to investigate the interaction between Tlp and MatE. Our results revealed that Tlp senses 2-methoxybenzoate and interacts with MatE to facilitate substrate transport. Furthermore, we observed that the matE knock-out mutant significantly impaired the growth and methane production of M. shengliensis when using 2-methoxybenzoate as a substrate, highlighting the essential role of MatE in methoxydotrophic methanogenesis. Overall, our findings suggest that the MatE-Tlp system regulates substrate uptake and methane metabolism in M. shengliensis, providing new avenues for reducing global methane emissions caused by methanogens.
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institution Kabale University
issn 2399-3642
language English
publishDate 2025-02-01
publisher Nature Portfolio
record_format Article
series Communications Biology
spelling doaj-art-8e3e37a75b1146b28c7d90c08a5b86002025-02-09T12:50:40ZengNature PortfolioCommunications Biology2399-36422025-02-01811710.1038/s42003-025-07583-1MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compoundsHuan Leng0Dong Wang1Qing Yang2Shuxin Wang3Leizhou Guo4Pengyan Zhao5Yi Chen6Lirong Dai7Guihong Cha8Liping Bai9Frank Delvigne10Key Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsCollege of Veterinary Medicine, Northwest A&F UniversityKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural AffairsTerra Research and Teaching Centre, Microbial Processes and Interactions (MiPI), Gembloux Agro-Bio Tech, University of LiègeAbstract Methoxylated aromatic compounds, are abundant in subsurface ecosystems. Recently, it was discovered that Methermicoccus shengliensis can convert methoxylated aromatics to methane. Specifically, the MATE family transporters (MatE) and transduction-like protein (Tlp) were hypothesized to play a crucial role in substrate transport. However, their biological function and the transporting model remained unclear. To address this knowledge gap, we employed bacterial two-hybrid and structural model assays to investigate the interaction between Tlp and MatE. Our results revealed that Tlp senses 2-methoxybenzoate and interacts with MatE to facilitate substrate transport. Furthermore, we observed that the matE knock-out mutant significantly impaired the growth and methane production of M. shengliensis when using 2-methoxybenzoate as a substrate, highlighting the essential role of MatE in methoxydotrophic methanogenesis. Overall, our findings suggest that the MatE-Tlp system regulates substrate uptake and methane metabolism in M. shengliensis, providing new avenues for reducing global methane emissions caused by methanogens.https://doi.org/10.1038/s42003-025-07583-1
spellingShingle Huan Leng
Dong Wang
Qing Yang
Shuxin Wang
Leizhou Guo
Pengyan Zhao
Yi Chen
Lirong Dai
Guihong Cha
Liping Bai
Frank Delvigne
MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compounds
Communications Biology
title MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compounds
title_full MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compounds
title_fullStr MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compounds
title_full_unstemmed MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compounds
title_short MatE transporter affects methane metabolism in Methermicoccus shengliensis and is modulated by methoxylated aromatic compounds
title_sort mate transporter affects methane metabolism in methermicoccus shengliensis and is modulated by methoxylated aromatic compounds
url https://doi.org/10.1038/s42003-025-07583-1
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