Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals

Treatment options for viral infections are limited and viruses have proven adept at evolving resistance to many existing therapies, highlighting a significant vulnerability in our defenses. In response to this challenge, we explored the modulation of cellular RNA metabolic processes as an alternativ...

Full description

Saved in:
Bibliographic Details
Main Authors: Ali Zahedi Amiri, Choudhary Ahmed, Subha Dahal, Filomena Grosso, Haomin Leng, Peter Stoilov, Maria Mangos, Johanne Toutant, Lulzim Shkreta, Liliana Attisano, Benoit Chabot, Martha Brown, Mario Huesca, Alan Cochrane
Format: Article
Language:English
Published: MDPI AG 2024-12-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/17/1/54
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1832587368604893184
author Ali Zahedi Amiri
Choudhary Ahmed
Subha Dahal
Filomena Grosso
Haomin Leng
Peter Stoilov
Maria Mangos
Johanne Toutant
Lulzim Shkreta
Liliana Attisano
Benoit Chabot
Martha Brown
Mario Huesca
Alan Cochrane
author_facet Ali Zahedi Amiri
Choudhary Ahmed
Subha Dahal
Filomena Grosso
Haomin Leng
Peter Stoilov
Maria Mangos
Johanne Toutant
Lulzim Shkreta
Liliana Attisano
Benoit Chabot
Martha Brown
Mario Huesca
Alan Cochrane
author_sort Ali Zahedi Amiri
collection DOAJ
description Treatment options for viral infections are limited and viruses have proven adept at evolving resistance to many existing therapies, highlighting a significant vulnerability in our defenses. In response to this challenge, we explored the modulation of cellular RNA metabolic processes as an alternative paradigm to antiviral development. Previously, the small molecule 5342191 was identified as a potent inhibitor of HIV-1 replication by altering viral RNA accumulation at doses that minimally affect host gene expression. In this report, we document 5342191 as a potent inhibitor of adenovirus, coronavirus, and influenza replication. In each case, 5342191-mediated reduction in virus replication was associated with altered viral RNA accumulation and loss of viral structural protein expression. Interestingly, while resistant viruses were rapidly isolated for compounds targeting either virus-encoded proteases or polymerases, we have not yet isolated 5342191-resistant variants of coronavirus or influenza. As with HIV-1, 5342191’s inhibition of coronaviruses and influenza is mediated through the activation of specific cell signaling networks, including GPCR and/or MAPK signaling pathways that ultimately affect SR kinase expression. Together, these studies highlight the therapeutic potential of compounds that target cellular processes essential for the replication of multiple viruses. Not only do these compounds hold promise as broad-spectrum antivirals, but they also offer the potential of greater resilience in combating viral infections.
format Article
id doaj-art-8b16f3478d8348b7a751fdd7a2c0b5d3
institution Kabale University
issn 1999-4915
language English
publishDate 2024-12-01
publisher MDPI AG
record_format Article
series Viruses
spelling doaj-art-8b16f3478d8348b7a751fdd7a2c0b5d32025-01-24T13:52:25ZengMDPI AGViruses1999-49152024-12-011715410.3390/v17010054Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel AntiviralsAli Zahedi Amiri0Choudhary Ahmed1Subha Dahal2Filomena Grosso3Haomin Leng4Peter Stoilov5Maria Mangos6Johanne Toutant7Lulzim Shkreta8Liliana Attisano9Benoit Chabot10Martha Brown11Mario Huesca12Alan Cochrane13Virocarb Inc., Toronto, ON M8V 3Y3, CanadaVirocarb Inc., Toronto, ON M8V 3Y3, CanadaDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, CanadaDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, CanadaDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, CanadaDepartment of Biochemistry and Molecular Medicine, West Virginia University, Morgantown, WV 26506, USADepartment of Biochemistry, University of Toronto, Toronto, ON M5S 1A8, CanadaDepartment of Microbiology and Infectious Diseases, Université de Sherbrooke, Sherbrooke, QC J1K 2R1, CanadaDepartment of Microbiology and Infectious Diseases, Université de Sherbrooke, Sherbrooke, QC J1K 2R1, CanadaDepartment of Biochemistry, University of Toronto, Toronto, ON M5S 1A8, CanadaDepartment of Microbiology and Infectious Diseases, Université de Sherbrooke, Sherbrooke, QC J1K 2R1, CanadaDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, CanadaVirocarb Inc., Toronto, ON M8V 3Y3, CanadaDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, CanadaTreatment options for viral infections are limited and viruses have proven adept at evolving resistance to many existing therapies, highlighting a significant vulnerability in our defenses. In response to this challenge, we explored the modulation of cellular RNA metabolic processes as an alternative paradigm to antiviral development. Previously, the small molecule 5342191 was identified as a potent inhibitor of HIV-1 replication by altering viral RNA accumulation at doses that minimally affect host gene expression. In this report, we document 5342191 as a potent inhibitor of adenovirus, coronavirus, and influenza replication. In each case, 5342191-mediated reduction in virus replication was associated with altered viral RNA accumulation and loss of viral structural protein expression. Interestingly, while resistant viruses were rapidly isolated for compounds targeting either virus-encoded proteases or polymerases, we have not yet isolated 5342191-resistant variants of coronavirus or influenza. As with HIV-1, 5342191’s inhibition of coronaviruses and influenza is mediated through the activation of specific cell signaling networks, including GPCR and/or MAPK signaling pathways that ultimately affect SR kinase expression. Together, these studies highlight the therapeutic potential of compounds that target cellular processes essential for the replication of multiple viruses. Not only do these compounds hold promise as broad-spectrum antivirals, but they also offer the potential of greater resilience in combating viral infections.https://www.mdpi.com/1999-4915/17/1/54broad-spectrum antiviralRNA processingadenoviruscoronavirusinfluenza
spellingShingle Ali Zahedi Amiri
Choudhary Ahmed
Subha Dahal
Filomena Grosso
Haomin Leng
Peter Stoilov
Maria Mangos
Johanne Toutant
Lulzim Shkreta
Liliana Attisano
Benoit Chabot
Martha Brown
Mario Huesca
Alan Cochrane
Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals
Viruses
broad-spectrum antiviral
RNA processing
adenovirus
coronavirus
influenza
title Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals
title_full Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals
title_fullStr Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals
title_full_unstemmed Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals
title_short Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals
title_sort exploiting the achilles heel of viral rna processing to develop novel antivirals
topic broad-spectrum antiviral
RNA processing
adenovirus
coronavirus
influenza
url https://www.mdpi.com/1999-4915/17/1/54
work_keys_str_mv AT alizahediamiri exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT choudharyahmed exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT subhadahal exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT filomenagrosso exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT haominleng exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT peterstoilov exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT mariamangos exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT johannetoutant exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT lulzimshkreta exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT lilianaattisano exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT benoitchabot exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT marthabrown exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT mariohuesca exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals
AT alancochrane exploitingtheachillesheelofviralrnaprocessingtodevelopnovelantivirals