Public health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in Egypt

Abstract Escherichia coli (E. coli) infections cause significant losses in the poultry industry and pose zoonotic risks due to rising antimicrobial resistance (AMR) and virulence factors. This study investigates E. coli prevalence, AMR, and virulence genes (papC, vgrG1, iss) in Egyptian chickens and...

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Main Authors: Zeinab S. Ahmed, Mahmoud E. Hashad, Yasser Atef, Heba Badr, Mahmoud Elhariri, Mona Kadry
Format: Article
Language:English
Published: Nature Portfolio 2025-04-01
Series:Scientific Reports
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Online Access:https://doi.org/10.1038/s41598-025-94177-w
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author Zeinab S. Ahmed
Mahmoud E. Hashad
Yasser Atef
Heba Badr
Mahmoud Elhariri
Mona Kadry
author_facet Zeinab S. Ahmed
Mahmoud E. Hashad
Yasser Atef
Heba Badr
Mahmoud Elhariri
Mona Kadry
author_sort Zeinab S. Ahmed
collection DOAJ
description Abstract Escherichia coli (E. coli) infections cause significant losses in the poultry industry and pose zoonotic risks due to rising antimicrobial resistance (AMR) and virulence factors. This study investigates E. coli prevalence, AMR, and virulence genes (papC, vgrG1, iss) in Egyptian chickens and farm workers. A total of 35 dead chickens from 14 flocks and 17 farm workers urine samples were examined bacteriologically to investigate E. coli presence followed by biochemical identification. Antimicrobial susceptibility testing was performed on 14 antibiotics using the disk diffusion method on Mueller–Hinton agar, following ‘Clinical and Laboratory Standards Institute (CLSI) (2020) guidelines with Extended-spectrum β-lactamase (ESBL) activity evaluated via the Double Disc Synergy Test (DDST) with ceftazidime, cefotaxime, and their clavulanate combinations following CLSI protocols. virulence genes were detected through polymerase chain reaction (PCR) and phylogenetic analysis of the vgrG1 gene evaluated genetic relatedness between the chicken and human isolates. The study analysed 52 samples, identifying E. coli in 18 chicken organs (51.4%) and 11 human urine samples (64.7%), with no significant difference. various antimicrobic sensitivity profiles were identified phenotypically among all isolates in which 29 isolates, 58.6% were ESBL-producing, and 96.5% exhibited multidrug resistance (MDR), with chicken isolates showing higher resistance overall. virulence genes were detected in similar proportions across the isolates highlighting significant public health risks due to resistant and virulent E. coli. This study emphasized the public health risks of multidrug-resistant E. coli with virulence genes, highlighting potential zoonotic transmission and antibiotic use and food safety.
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spelling doaj-art-880cbedf45a1443aaeb19819ca3ff8392025-08-20T03:10:14ZengNature PortfolioScientific Reports2045-23222025-04-011511910.1038/s41598-025-94177-wPublic health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in EgyptZeinab S. Ahmed0Mahmoud E. Hashad1Yasser Atef2Heba Badr3Mahmoud Elhariri4Mona Kadry5Department of Zoonoses, Veterinary Medicine, Cairo UniversityDepartment of Microbiology, Veterinary Medicine, Cairo UniversityDepartment of Microbiology, Veterinary Medicine, Cairo UniversityAnimal Health Research InstituteDepartment of Microbiology, Veterinary Medicine, Cairo UniversityDepartment of Zoonoses, Veterinary Medicine, Cairo UniversityAbstract Escherichia coli (E. coli) infections cause significant losses in the poultry industry and pose zoonotic risks due to rising antimicrobial resistance (AMR) and virulence factors. This study investigates E. coli prevalence, AMR, and virulence genes (papC, vgrG1, iss) in Egyptian chickens and farm workers. A total of 35 dead chickens from 14 flocks and 17 farm workers urine samples were examined bacteriologically to investigate E. coli presence followed by biochemical identification. Antimicrobial susceptibility testing was performed on 14 antibiotics using the disk diffusion method on Mueller–Hinton agar, following ‘Clinical and Laboratory Standards Institute (CLSI) (2020) guidelines with Extended-spectrum β-lactamase (ESBL) activity evaluated via the Double Disc Synergy Test (DDST) with ceftazidime, cefotaxime, and their clavulanate combinations following CLSI protocols. virulence genes were detected through polymerase chain reaction (PCR) and phylogenetic analysis of the vgrG1 gene evaluated genetic relatedness between the chicken and human isolates. The study analysed 52 samples, identifying E. coli in 18 chicken organs (51.4%) and 11 human urine samples (64.7%), with no significant difference. various antimicrobic sensitivity profiles were identified phenotypically among all isolates in which 29 isolates, 58.6% were ESBL-producing, and 96.5% exhibited multidrug resistance (MDR), with chicken isolates showing higher resistance overall. virulence genes were detected in similar proportions across the isolates highlighting significant public health risks due to resistant and virulent E. coli. This study emphasized the public health risks of multidrug-resistant E. coli with virulence genes, highlighting potential zoonotic transmission and antibiotic use and food safety.https://doi.org/10.1038/s41598-025-94177-wE. coliMulti-drug resistanceExtended-spectrum β-lactamasesVirulence genesPoultry
spellingShingle Zeinab S. Ahmed
Mahmoud E. Hashad
Yasser Atef
Heba Badr
Mahmoud Elhariri
Mona Kadry
Public health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in Egypt
Scientific Reports
E. coli
Multi-drug resistance
Extended-spectrum β-lactamases
Virulence genes
Poultry
title Public health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in Egypt
title_full Public health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in Egypt
title_fullStr Public health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in Egypt
title_full_unstemmed Public health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in Egypt
title_short Public health threat of antimicrobial resistance and virulence genes in Escherichia coli from human-chicken transmission in Egypt
title_sort public health threat of antimicrobial resistance and virulence genes in escherichia coli from human chicken transmission in egypt
topic E. coli
Multi-drug resistance
Extended-spectrum β-lactamases
Virulence genes
Poultry
url https://doi.org/10.1038/s41598-025-94177-w
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