Infectious disease phylodynamics with occurrence data

Infectious disease phylodynamics with occurrence data

Abstract Phylodynamic models use pathogen genome sequence data to infer epidemiological dynamics. With the increasing genomic surveillance of pathogens, especially during the SARS‐CoV‐2 pandemic, new practical questions about their use are emerging. One such question focuses on the inclusion of un‐s...

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Bibliographic Details
Main Authors: Leo A. Featherstone, Francesca Di Giallonardo, Edward C. Holmes, Timothy G. Vaughan, Sebastián Duchêne
Format: Article
Language:English
Published: Wiley 2021-08-01
Series:Methods in Ecology and Evolution
Subjects:
Bayesian statistics
birth–death
coalescent
pathogens
phylodynamics
Online Access:https://doi.org/10.1111/2041-210X.13620
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https://doi.org/10.1111/2041-210X.13620

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