Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems

Abstract Microscale O2 availability in soil, a main factor influencing microbial processing of soil carbon and nitrogen, is a function of O2 diffusion and microbial O2 consumption. While O2 diffusivity is widely studied, it is difficult to quantify the rate of microbial O2 consumption (MO). In this...

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Main Authors: Poulamee Chakraborty, Andrey Guber, Alexandra Kravchenko
Format: Article
Language:English
Published: Wiley 2025-01-01
Series:Vadose Zone Journal
Online Access:https://doi.org/10.1002/vzj2.70001
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author Poulamee Chakraborty
Andrey Guber
Alexandra Kravchenko
author_facet Poulamee Chakraborty
Andrey Guber
Alexandra Kravchenko
author_sort Poulamee Chakraborty
collection DOAJ
description Abstract Microscale O2 availability in soil, a main factor influencing microbial processing of soil carbon and nitrogen, is a function of O2 diffusion and microbial O2 consumption. While O2 diffusivity is widely studied, it is difficult to quantify the rate of microbial O2 consumption (MO). In this study, we quantified the MO using O2 microsensor profiling to compare MO in different soils and vegetation systems while manipulating the soil pore structure. Soil samples were collected from three bioenergy vegetation systems, sorghum (Sorghum bicolor L. Moench), switchgrass (Panicum virgatum L.), and prairie, at an experimental site in Southeast Michigan, and from switchgrass and prairie systems at two sites in South and North Wisconsin. We prepared soil cores with two contrasting pore structures, that is, large (>30 µm Ø) pore‐dominated soil (LP) and small (<10 µm Ø) pore‐dominated soil (SP), from the same 1‐ to 2‐mm soil size fraction. We quantified MO (nmol O2 cm−3 s−1) using a microprofiler with an oxygen (OX‐100 µm) microsensor (Unisense) pre‐ and post‐38‐day incubation. Across all studied systems, there was a trend for a decrease in SP MO post‐incubation, suggesting a change in microbial metabolism to lower O2 utilization. However, sizeable microbial O2 consumption continued in the LP soils, further corroborated by a positive correlation between the C‐CO2 emission rate and the post‐incubation MO, highlighting that LP provided a better physical microenvironment for the soil microbes.
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spelling doaj-art-84b86f9ae2dd45b88723d69a827e33692025-08-20T02:45:15ZengWileyVadose Zone Journal1539-16632025-01-01241n/an/a10.1002/vzj2.70001Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systemsPoulamee Chakraborty0Andrey Guber1Alexandra Kravchenko2Department of Plant Soil and Microbial Sciences Michigan State University East Lansing Michigan USADepartment of Plant Soil and Microbial Sciences Michigan State University East Lansing Michigan USADepartment of Plant Soil and Microbial Sciences Michigan State University East Lansing Michigan USAAbstract Microscale O2 availability in soil, a main factor influencing microbial processing of soil carbon and nitrogen, is a function of O2 diffusion and microbial O2 consumption. While O2 diffusivity is widely studied, it is difficult to quantify the rate of microbial O2 consumption (MO). In this study, we quantified the MO using O2 microsensor profiling to compare MO in different soils and vegetation systems while manipulating the soil pore structure. Soil samples were collected from three bioenergy vegetation systems, sorghum (Sorghum bicolor L. Moench), switchgrass (Panicum virgatum L.), and prairie, at an experimental site in Southeast Michigan, and from switchgrass and prairie systems at two sites in South and North Wisconsin. We prepared soil cores with two contrasting pore structures, that is, large (>30 µm Ø) pore‐dominated soil (LP) and small (<10 µm Ø) pore‐dominated soil (SP), from the same 1‐ to 2‐mm soil size fraction. We quantified MO (nmol O2 cm−3 s−1) using a microprofiler with an oxygen (OX‐100 µm) microsensor (Unisense) pre‐ and post‐38‐day incubation. Across all studied systems, there was a trend for a decrease in SP MO post‐incubation, suggesting a change in microbial metabolism to lower O2 utilization. However, sizeable microbial O2 consumption continued in the LP soils, further corroborated by a positive correlation between the C‐CO2 emission rate and the post‐incubation MO, highlighting that LP provided a better physical microenvironment for the soil microbes.https://doi.org/10.1002/vzj2.70001
spellingShingle Poulamee Chakraborty
Andrey Guber
Alexandra Kravchenko
Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems
Vadose Zone Journal
title Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems
title_full Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems
title_fullStr Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems
title_full_unstemmed Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems
title_short Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems
title_sort microbial o2 consumption as a function of pore structure in soils of sorghum switchgrass and prairie vegetation systems
url https://doi.org/10.1002/vzj2.70001
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AT andreyguber microbialo2consumptionasafunctionofporestructureinsoilsofsorghumswitchgrassandprairievegetationsystems
AT alexandrakravchenko microbialo2consumptionasafunctionofporestructureinsoilsofsorghumswitchgrassandprairievegetationsystems