Benchmarking validity indices for evolutionary K-means clustering performance

Abstract K-Means is a well-established clustering algorithm widely used in data analysis and various real-world applications. However, its requirement for a predefined number of clusters limits its effectiveness in automatic clustering tasks. To address this, metaheuristic optimisation algorithms ha...

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Main Authors: Abiodun M. Ikotun, Faustin Habyarimana, Absalom E. Ezugwu
Format: Article
Language:English
Published: Nature Portfolio 2025-07-01
Series:Scientific Reports
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Online Access:https://doi.org/10.1038/s41598-025-08473-6
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author Abiodun M. Ikotun
Faustin Habyarimana
Absalom E. Ezugwu
author_facet Abiodun M. Ikotun
Faustin Habyarimana
Absalom E. Ezugwu
author_sort Abiodun M. Ikotun
collection DOAJ
description Abstract K-Means is a well-established clustering algorithm widely used in data analysis and various real-world applications. However, its requirement for a predefined number of clusters limits its effectiveness in automatic clustering tasks. To address this, metaheuristic optimisation algorithms have been integrated into K-Means, leading to the development of Evolutionary K-Means clustering approaches. These methods often rely on internal validity indices as fitness functions to automatically determine both the optimal number of clusters and the clustering configuration. However, the effectiveness of internal validity indices is often data-dependent, as most are tailored to specific data characteristics. Consequently, the choice of validity index can significantly influence clustering outcomes. This study evaluates the performance of fifteen internal validity indices within the Enhanced Firefly Algorithm-K-Means (FA-K-Means) framework, an evolutionary approach that integrates Firefly metaheuristics with the classical K-Means algorithm. The performance of each index is assessed across a diverse collection of real-life and synthetic datasets with varying structures. The results reveal that the Calinski-Harabasz (CH) and Silhouette indices consistently outperform others, offering more reliable clustering performance. These findings provide practical guidance for selecting appropriate fitness functions in Evolutionary K-Means algorithms for automatic clustering tasks.
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spelling doaj-art-826b372cc7e946429ac69374249d6cd92025-08-20T03:37:22ZengNature PortfolioScientific Reports2045-23222025-07-0115112410.1038/s41598-025-08473-6Benchmarking validity indices for evolutionary K-means clustering performanceAbiodun M. Ikotun0Faustin Habyarimana1Absalom E. Ezugwu2School of Mathematics, Statistics and Computer Science, University of KwaZulu- Natal, KwaZulu-NatalSchool of Mathematics, Statistics and Computer Science, University of KwaZulu- Natal, KwaZulu-NatalUnit for Data Science and Computing, North-West UniversityAbstract K-Means is a well-established clustering algorithm widely used in data analysis and various real-world applications. However, its requirement for a predefined number of clusters limits its effectiveness in automatic clustering tasks. To address this, metaheuristic optimisation algorithms have been integrated into K-Means, leading to the development of Evolutionary K-Means clustering approaches. These methods often rely on internal validity indices as fitness functions to automatically determine both the optimal number of clusters and the clustering configuration. However, the effectiveness of internal validity indices is often data-dependent, as most are tailored to specific data characteristics. Consequently, the choice of validity index can significantly influence clustering outcomes. This study evaluates the performance of fifteen internal validity indices within the Enhanced Firefly Algorithm-K-Means (FA-K-Means) framework, an evolutionary approach that integrates Firefly metaheuristics with the classical K-Means algorithm. The performance of each index is assessed across a diverse collection of real-life and synthetic datasets with varying structures. The results reveal that the Calinski-Harabasz (CH) and Silhouette indices consistently outperform others, offering more reliable clustering performance. These findings provide practical guidance for selecting appropriate fitness functions in Evolutionary K-Means algorithms for automatic clustering tasks.https://doi.org/10.1038/s41598-025-08473-6Clustering algorithmsAutomatic clusteringMetaheuristic optimisationK-meansCluster validity indicesEvolutionary k-means
spellingShingle Abiodun M. Ikotun
Faustin Habyarimana
Absalom E. Ezugwu
Benchmarking validity indices for evolutionary K-means clustering performance
Scientific Reports
Clustering algorithms
Automatic clustering
Metaheuristic optimisation
K-means
Cluster validity indices
Evolutionary k-means
title Benchmarking validity indices for evolutionary K-means clustering performance
title_full Benchmarking validity indices for evolutionary K-means clustering performance
title_fullStr Benchmarking validity indices for evolutionary K-means clustering performance
title_full_unstemmed Benchmarking validity indices for evolutionary K-means clustering performance
title_short Benchmarking validity indices for evolutionary K-means clustering performance
title_sort benchmarking validity indices for evolutionary k means clustering performance
topic Clustering algorithms
Automatic clustering
Metaheuristic optimisation
K-means
Cluster validity indices
Evolutionary k-means
url https://doi.org/10.1038/s41598-025-08473-6
work_keys_str_mv AT abiodunmikotun benchmarkingvalidityindicesforevolutionarykmeansclusteringperformance
AT faustinhabyarimana benchmarkingvalidityindicesforevolutionarykmeansclusteringperformance
AT absalomeezugwu benchmarkingvalidityindicesforevolutionarykmeansclusteringperformance