Tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers

Abstract Vaccine responses vary across populations and are influenced by numerous intrinsic and extrinsic factors, including the gut microbiota. However, studies linking microbiota composition to vaccine immunogenicity in low- and middle-income countries are sparse. In this study, we examined the gu...

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Main Authors: Jeremia J. Pyuza, Marloes M. A. R. van Dorst, David Barnett, Koen Stam, Mikhael Manurung, Linda Wammes, Marion König, Yvonne Kruize, Nikuntufya Andongolile, Anastazia Ngowi, Elichilia R. Shao, Vesla I. Kullaya, Alex Mremi, Pancras C. W. Hogendoorn, Sia E. Msuya, Simon P. Jochems, John Penders, Maria Yazdanbakhsh, Wouter A. A. de Steenhuijsen Piters
Format: Article
Language:English
Published: Nature Portfolio 2025-06-01
Series:npj Biofilms and Microbiomes
Online Access:https://doi.org/10.1038/s41522-025-00687-w
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author Jeremia J. Pyuza
Marloes M. A. R. van Dorst
David Barnett
Koen Stam
Mikhael Manurung
Linda Wammes
Marion König
Yvonne Kruize
Nikuntufya Andongolile
Anastazia Ngowi
Elichilia R. Shao
Vesla I. Kullaya
Alex Mremi
Pancras C. W. Hogendoorn
Sia E. Msuya
Simon P. Jochems
John Penders
Maria Yazdanbakhsh
Wouter A. A. de Steenhuijsen Piters
author_facet Jeremia J. Pyuza
Marloes M. A. R. van Dorst
David Barnett
Koen Stam
Mikhael Manurung
Linda Wammes
Marion König
Yvonne Kruize
Nikuntufya Andongolile
Anastazia Ngowi
Elichilia R. Shao
Vesla I. Kullaya
Alex Mremi
Pancras C. W. Hogendoorn
Sia E. Msuya
Simon P. Jochems
John Penders
Maria Yazdanbakhsh
Wouter A. A. de Steenhuijsen Piters
author_sort Jeremia J. Pyuza
collection DOAJ
description Abstract Vaccine responses vary across populations and are influenced by numerous intrinsic and extrinsic factors, including the gut microbiota. However, studies linking microbiota composition to vaccine immunogenicity in low- and middle-income countries are sparse. In this study, we examined the gut microbiota of 143 healthy rural and urban living Tanzanians who participated in a yellow fever vaccine (YF-17D) trial. We found significant differences in gut microbiota profiles between rural and urban participants. Rural-associated microbiota showed higher diversity and enrichment of taxa like Prevotella and Succinivibrio, which were linked to dietary intake patterns. Yellow fever neutralizing antibody titers were higher in rural compared to urban participants. Interestingly, a subset of urban individuals with a rural-like microbiota had higher antibody titers and faster antibody waning than those with a more industrialized microbiota. These findings suggest that gut microbiota composition might be linked to vaccine immunogenicity, potentially outweighing the influence of living location.
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spelling doaj-art-7ecf73871b004985bf35075cd699f0e72025-08-20T02:37:13ZengNature Portfolionpj Biofilms and Microbiomes2055-50082025-06-0111111510.1038/s41522-025-00687-wTanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titersJeremia J. Pyuza0Marloes M. A. R. van Dorst1David Barnett2Koen Stam3Mikhael Manurung4Linda Wammes5Marion König6Yvonne Kruize7Nikuntufya Andongolile8Anastazia Ngowi9Elichilia R. Shao10Vesla I. Kullaya11Alex Mremi12Pancras C. W. Hogendoorn13Sia E. Msuya14Simon P. Jochems15John Penders16Maria Yazdanbakhsh17Wouter A. A. de Steenhuijsen Piters18Leiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterDepartment of Medical Microbiology, Infectious Diseases and Infection Prevention, NUTRIM Research Institute on Nutrition and Translational Research in Metabolism, Maastricht University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterDepartment of Community Medicine, Kilimanjaro Christian Medical Centre (KCMC)Department of Community Medicine, Kilimanjaro Christian Medical Centre (KCMC)Department of Internal Medicine, KCMC UniversityKilimanjaro Clinical Research Institute (KCRI), Kilimanjaro Christian Medical Centre (KCMC)Department of Pathology, Kilimanjaro Christian Medical Centre (KCMC)Department of Pathology, Leiden University Medical Center (LUMC)School of Public Health, KCMC UniversityLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterDepartment of Medical Microbiology, Infectious Diseases and Infection Prevention, NUTRIM Research Institute on Nutrition and Translational Research in Metabolism, Maastricht University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterLeiden University Center for Infectious Diseases (LUCID), Leiden University Medical CenterAbstract Vaccine responses vary across populations and are influenced by numerous intrinsic and extrinsic factors, including the gut microbiota. However, studies linking microbiota composition to vaccine immunogenicity in low- and middle-income countries are sparse. In this study, we examined the gut microbiota of 143 healthy rural and urban living Tanzanians who participated in a yellow fever vaccine (YF-17D) trial. We found significant differences in gut microbiota profiles between rural and urban participants. Rural-associated microbiota showed higher diversity and enrichment of taxa like Prevotella and Succinivibrio, which were linked to dietary intake patterns. Yellow fever neutralizing antibody titers were higher in rural compared to urban participants. Interestingly, a subset of urban individuals with a rural-like microbiota had higher antibody titers and faster antibody waning than those with a more industrialized microbiota. These findings suggest that gut microbiota composition might be linked to vaccine immunogenicity, potentially outweighing the influence of living location.https://doi.org/10.1038/s41522-025-00687-w
spellingShingle Jeremia J. Pyuza
Marloes M. A. R. van Dorst
David Barnett
Koen Stam
Mikhael Manurung
Linda Wammes
Marion König
Yvonne Kruize
Nikuntufya Andongolile
Anastazia Ngowi
Elichilia R. Shao
Vesla I. Kullaya
Alex Mremi
Pancras C. W. Hogendoorn
Sia E. Msuya
Simon P. Jochems
John Penders
Maria Yazdanbakhsh
Wouter A. A. de Steenhuijsen Piters
Tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers
npj Biofilms and Microbiomes
title Tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers
title_full Tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers
title_fullStr Tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers
title_full_unstemmed Tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers
title_short Tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers
title_sort tanzanian gut microbiota profiles linked to high but rapidly waning yellow fever antibody titers
url https://doi.org/10.1038/s41522-025-00687-w
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