Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786)
Platygyra daedalea Ellis & Solander, 1786, is a dominant species within the world’s warmest reefs, making it a critical model for investigating coral stress resistance and adaptive evolutionary mechanisms. This study presents the first sequenced and annotated mitogenome of the reef-building cora...
Saved in:
| Main Authors: | , , , , , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2025-06-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2025.2499129 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| _version_ | 1850255012952801280 |
|---|---|
| author | Xinyao Chang Xiaomei Chen Shaowen Ke Xing Li Kai Chen Yuli Li Lisui Bao Jingjie Hu Shi Wang Zhenmin Bao |
| author_facet | Xinyao Chang Xiaomei Chen Shaowen Ke Xing Li Kai Chen Yuli Li Lisui Bao Jingjie Hu Shi Wang Zhenmin Bao |
| author_sort | Xinyao Chang |
| collection | DOAJ |
| description | Platygyra daedalea Ellis & Solander, 1786, is a dominant species within the world’s warmest reefs, making it a critical model for investigating coral stress resistance and adaptive evolutionary mechanisms. This study presents the first sequenced and annotated mitogenome of the reef-building coral P. daedalea. The mitogenome is 16,363 bp in length, containing 13 protein-coding genes, two ribosomal RNA genes, and two transfer RNA genes. The base composition is 24.8% adenine (A), 13% cytosine (C), 20.4% guanine (G), and 41.8% thymine (T), with a G-C content of 33.4%. We conducted a comparative analysis between P. daedalea and P. carnosa. Notably, genetic variations in the ND5 and COXI genes emerge as potential markers for distinguishing species within the Platygyra genus. Additionally, the protein-coding gene ND6 has been subjected to strong selective pressure. Phylogenetic analysis based on the complete mitogenome aligns with the internal clade structure of Scleractinia reported in previous studies, reinforcing the evolutionary insights provided by this dataset. |
| format | Article |
| id | doaj-art-7de5fe54d80e4dc6a1b9622a25143585 |
| institution | OA Journals |
| issn | 2380-2359 |
| language | English |
| publishDate | 2025-06-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-7de5fe54d80e4dc6a1b9622a251435852025-08-20T01:57:00ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592025-06-0110641441910.1080/23802359.2025.2499129Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786)Xinyao Chang0Xiaomei Chen1Shaowen Ke2Xing Li3Kai Chen4Yuli Li5Lisui Bao6Jingjie Hu7Shi Wang8Zhenmin Bao9Key Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaKey Laboratory of Tropical Aquatic Germplasm of Hainan Province & MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Sanya/Qingdao, ChinaPlatygyra daedalea Ellis & Solander, 1786, is a dominant species within the world’s warmest reefs, making it a critical model for investigating coral stress resistance and adaptive evolutionary mechanisms. This study presents the first sequenced and annotated mitogenome of the reef-building coral P. daedalea. The mitogenome is 16,363 bp in length, containing 13 protein-coding genes, two ribosomal RNA genes, and two transfer RNA genes. The base composition is 24.8% adenine (A), 13% cytosine (C), 20.4% guanine (G), and 41.8% thymine (T), with a G-C content of 33.4%. We conducted a comparative analysis between P. daedalea and P. carnosa. Notably, genetic variations in the ND5 and COXI genes emerge as potential markers for distinguishing species within the Platygyra genus. Additionally, the protein-coding gene ND6 has been subjected to strong selective pressure. Phylogenetic analysis based on the complete mitogenome aligns with the internal clade structure of Scleractinia reported in previous studies, reinforcing the evolutionary insights provided by this dataset.https://www.tandfonline.com/doi/10.1080/23802359.2025.2499129Mitochondrial genomePlatygyra daedaleaphylogeny |
| spellingShingle | Xinyao Chang Xiaomei Chen Shaowen Ke Xing Li Kai Chen Yuli Li Lisui Bao Jingjie Hu Shi Wang Zhenmin Bao Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786) Mitochondrial DNA. Part B. Resources Mitochondrial genome Platygyra daedalea phylogeny |
| title | Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786) |
| title_full | Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786) |
| title_fullStr | Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786) |
| title_full_unstemmed | Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786) |
| title_short | Complete mitochondrial genome of the brain coral Platygyra daedalea (Ellis & Solander, 1786) |
| title_sort | complete mitochondrial genome of the brain coral platygyra daedalea ellis solander 1786 |
| topic | Mitochondrial genome Platygyra daedalea phylogeny |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2025.2499129 |
| work_keys_str_mv | AT xinyaochang completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT xiaomeichen completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT shaowenke completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT xingli completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT kaichen completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT yulili completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT lisuibao completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT jingjiehu completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT shiwang completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 AT zhenminbao completemitochondrialgenomeofthebraincoralplatygyradaedaleaellissolander1786 |