Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>

Plant Parasitic Nematodes (PPNs) are a major problem in agriculture. Damage caused by PPNs has been estimated at USD 80–157 billion annually. The estimates could be even worse in the future in the context of a growing world population in a climate change scenario and with the removal/reduction in th...

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Main Authors: Benedetta Caraba, Arianna Montanari, Emily Schifano, Fabiana Stocchi, Giovanna Costanzo, Daniela Uccelletti, Cristina Mazzoni
Format: Article
Language:English
Published: MDPI AG 2025-07-01
Series:Current Issues in Molecular Biology
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Online Access:https://www.mdpi.com/1467-3045/47/7/570
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author Benedetta Caraba
Arianna Montanari
Emily Schifano
Fabiana Stocchi
Giovanna Costanzo
Daniela Uccelletti
Cristina Mazzoni
author_facet Benedetta Caraba
Arianna Montanari
Emily Schifano
Fabiana Stocchi
Giovanna Costanzo
Daniela Uccelletti
Cristina Mazzoni
author_sort Benedetta Caraba
collection DOAJ
description Plant Parasitic Nematodes (PPNs) are a major problem in agriculture. Damage caused by PPNs has been estimated at USD 80–157 billion annually. The estimates could be even worse in the future in the context of a growing world population in a climate change scenario and with the removal/reduction in the use of some nematodicides due to the strong ecological impact. Biocontrol Agents (BCAs) currently constitute only 8.8% of the general pesticide market. With a view to an ecological transition, the transition from pesticides to biopesticides represents an important challenge that appears necessary not only for organic farming, but also in so-called integrated agriculture. Among the possible BCAs, microorganisms, and in particular yeast, which enjoys the GRAS (Generally Recognized As Safe) status, have the advantage of being able to be produced on a large scale by fermentation on waste substrates at low cost. In this paper, as proof of concept we constructed yeast strains expressing short hairpin RNAs (shRNAs) targeting the <i>daf-16</i> gene in <i>C. elegans</i>. We demonstrate that oral ingestion of yeast cells expressing DAF16 shRNA is efficient in lowering <i>daf-16</i> expression and lifespan, suggesting a sustainable RNA interference-based strategy to inhibit the development of PPNs.
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spelling doaj-art-7b6522f540df4e608ba4e931e490776c2025-08-20T03:58:31ZengMDPI AGCurrent Issues in Molecular Biology1467-30371467-30452025-07-0147757010.3390/cimb47070570Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>Benedetta Caraba0Arianna Montanari1Emily Schifano2Fabiana Stocchi3Giovanna Costanzo4Daniela Uccelletti5Cristina Mazzoni6Department of Biology and Biotechnologies “C. Darwin”, Sapienza University of Rome, 00185 Rome, ItalyDepartment of Biology and Biotechnologies “C. Darwin”, Sapienza University of Rome, 00185 Rome, ItalyDepartment of Biology and Biotechnologies “C. Darwin”, Sapienza University of Rome, 00185 Rome, ItalyDepartment of Biology and Biotechnologies “C. Darwin”, Sapienza University of Rome, 00185 Rome, ItalyInstitute of Molecular Biology and Pathology, National Research Council (IBPM-CNR), 00185 Rome, ItalyDepartment of Biology and Biotechnologies “C. Darwin”, Sapienza University of Rome, 00185 Rome, ItalyDepartment of Biology and Biotechnologies “C. Darwin”, Sapienza University of Rome, 00185 Rome, ItalyPlant Parasitic Nematodes (PPNs) are a major problem in agriculture. Damage caused by PPNs has been estimated at USD 80–157 billion annually. The estimates could be even worse in the future in the context of a growing world population in a climate change scenario and with the removal/reduction in the use of some nematodicides due to the strong ecological impact. Biocontrol Agents (BCAs) currently constitute only 8.8% of the general pesticide market. With a view to an ecological transition, the transition from pesticides to biopesticides represents an important challenge that appears necessary not only for organic farming, but also in so-called integrated agriculture. Among the possible BCAs, microorganisms, and in particular yeast, which enjoys the GRAS (Generally Recognized As Safe) status, have the advantage of being able to be produced on a large scale by fermentation on waste substrates at low cost. In this paper, as proof of concept we constructed yeast strains expressing short hairpin RNAs (shRNAs) targeting the <i>daf-16</i> gene in <i>C. elegans</i>. We demonstrate that oral ingestion of yeast cells expressing DAF16 shRNA is efficient in lowering <i>daf-16</i> expression and lifespan, suggesting a sustainable RNA interference-based strategy to inhibit the development of PPNs.https://www.mdpi.com/1467-3045/47/7/570yeastoral deliverynematodesRNA interferenceBiocontrol Agent
spellingShingle Benedetta Caraba
Arianna Montanari
Emily Schifano
Fabiana Stocchi
Giovanna Costanzo
Daniela Uccelletti
Cristina Mazzoni
Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>
Current Issues in Molecular Biology
yeast
oral delivery
nematodes
RNA interference
Biocontrol Agent
title Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>
title_full Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>
title_fullStr Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>
title_full_unstemmed Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>
title_short Yeast Oral Delivery of DAF16 shRNAs Results in Effective Gene Silencing in <i>C. elegans</i>
title_sort yeast oral delivery of daf16 shrnas results in effective gene silencing in i c elegans i
topic yeast
oral delivery
nematodes
RNA interference
Biocontrol Agent
url https://www.mdpi.com/1467-3045/47/7/570
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